Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABK70822.1 | ABK72626.1 | MSMEG_4033 | MSMEG_3988 | TetR-family protein transcriptional regulator; Identified by match to protein family HMM PF00440. | Transcriptional regulator, AsnC family protein; Identified by match to protein family HMM PF01037. | 0.430 |
ABK70822.1 | ABK73709.1 | MSMEG_4033 | MSMEG_4034 | TetR-family protein transcriptional regulator; Identified by match to protein family HMM PF00440. | NAD dependent epimerase/dehydratase family protein; Identified by match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF05368; match to protein family HMM PF07993. | 0.562 |
ABK70822.1 | ABK74203.1 | MSMEG_4033 | MSMEG_2710 | TetR-family protein transcriptional regulator; Identified by match to protein family HMM PF00440. | Hypothetical protein; Identified by Glimmer2; putative. | 0.404 |
ABK70822.1 | ABK74448.1 | MSMEG_4033 | MSMEG_0548 | TetR-family protein transcriptional regulator; Identified by match to protein family HMM PF00440. | Chromosome replication initiation inhibitor protein; Identified by match to protein family HMM PF00126; Belongs to the LysR transcriptional regulatory family. | 0.445 |
ABK70822.1 | ABK75187.1 | MSMEG_4033 | MSMEG_4032 | TetR-family protein transcriptional regulator; Identified by match to protein family HMM PF00440. | Zinc-binding alcohol dehydrogenase; Identified by match to protein family HMM PF00107. | 0.536 |
ABK72626.1 | ABK70822.1 | MSMEG_3988 | MSMEG_4033 | Transcriptional regulator, AsnC family protein; Identified by match to protein family HMM PF01037. | TetR-family protein transcriptional regulator; Identified by match to protein family HMM PF00440. | 0.430 |
ABK73709.1 | ABK70822.1 | MSMEG_4034 | MSMEG_4033 | NAD dependent epimerase/dehydratase family protein; Identified by match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF05368; match to protein family HMM PF07993. | TetR-family protein transcriptional regulator; Identified by match to protein family HMM PF00440. | 0.562 |
ABK73709.1 | ABK75187.1 | MSMEG_4034 | MSMEG_4032 | NAD dependent epimerase/dehydratase family protein; Identified by match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF05368; match to protein family HMM PF07993. | Zinc-binding alcohol dehydrogenase; Identified by match to protein family HMM PF00107. | 0.621 |
ABK74203.1 | ABK70822.1 | MSMEG_2710 | MSMEG_4033 | Hypothetical protein; Identified by Glimmer2; putative. | TetR-family protein transcriptional regulator; Identified by match to protein family HMM PF00440. | 0.404 |
ABK74448.1 | ABK70822.1 | MSMEG_0548 | MSMEG_4033 | Chromosome replication initiation inhibitor protein; Identified by match to protein family HMM PF00126; Belongs to the LysR transcriptional regulatory family. | TetR-family protein transcriptional regulator; Identified by match to protein family HMM PF00440. | 0.445 |
ABK75187.1 | ABK70822.1 | MSMEG_4032 | MSMEG_4033 | Zinc-binding alcohol dehydrogenase; Identified by match to protein family HMM PF00107. | TetR-family protein transcriptional regulator; Identified by match to protein family HMM PF00440. | 0.536 |
ABK75187.1 | ABK73709.1 | MSMEG_4032 | MSMEG_4034 | Zinc-binding alcohol dehydrogenase; Identified by match to protein family HMM PF00107. | NAD dependent epimerase/dehydratase family protein; Identified by match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF05368; match to protein family HMM PF07993. | 0.621 |