STRINGSTRING
ABK70822.1 ABK70822.1 ABK73709.1 ABK73709.1 ABK75187.1 ABK75187.1 ABK74448.1 ABK74448.1 ABK72626.1 ABK72626.1 ABK74203.1 ABK74203.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK70822.1TetR-family protein transcriptional regulator; Identified by match to protein family HMM PF00440. (217 aa)    
Predicted Functional Partners:
ABK73709.1
NAD dependent epimerase/dehydratase family protein; Identified by match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF05368; match to protein family HMM PF07993.
  
    0.562
ABK75187.1
Zinc-binding alcohol dehydrogenase; Identified by match to protein family HMM PF00107.
       0.536
ABK74448.1
Chromosome replication initiation inhibitor protein; Identified by match to protein family HMM PF00126; Belongs to the LysR transcriptional regulatory family.
   
   0.445
ABK72626.1
Transcriptional regulator, AsnC family protein; Identified by match to protein family HMM PF01037.
  
   
 0.430
ABK74203.1
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.404
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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