ABK72346.1 protein (Mycolicibacterium smegmatis)

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Score

ABK72346.1

crotonobetaine/carnitine-CoA ligase; Identified by match to protein family HMM PF00501. (515 aa)

Predicted Functional Partners:

ABK73320.1

0.828

ABK71774.1

0.735

pks

0.708

ABK70529.1

0.692

pks5

0.686

rplF

0.643

ABK72398.1

0.634

ABK70948.1

0.627

ABK73027.1

0.626

ABK71464.1

0.608

Your Current Organism:

Mycolicibacterium smegmatis

NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ABK70529.1	ABK70948.1	MSMEG_6767	MSMEG_0718	Mycocerosic acid synthase; Identified by match to protein family HMM PF00106; match to protein family HMM PF00109; match to protein family HMM PF00550; match to protein family HMM PF00698; match to protein family HMM PF02801.	acetyl-CoA synthetase; Identified by match to protein family HMM PF00501.	0.478
ABK70529.1	ABK71774.1	MSMEG_6767	MSMEG_6392	Mycocerosic acid synthase; Identified by match to protein family HMM PF00106; match to protein family HMM PF00109; match to protein family HMM PF00550; match to protein family HMM PF00698; match to protein family HMM PF02801.	Polyketide synthase; Identified by match to protein family HMM PF00109; match to protein family HMM PF00550; match to protein family HMM PF00698; match to protein family HMM PF00975; match to protein family HMM PF02801.	0.964
ABK70529.1	ABK72346.1	MSMEG_6767	MSMEG_4036	Mycocerosic acid synthase; Identified by match to protein family HMM PF00106; match to protein family HMM PF00109; match to protein family HMM PF00550; match to protein family HMM PF00698; match to protein family HMM PF02801.	crotonobetaine/carnitine-CoA ligase; Identified by match to protein family HMM PF00501.	0.692
ABK70529.1	ABK72398.1	MSMEG_6767	MSMEG_0019	Mycocerosic acid synthase; Identified by match to protein family HMM PF00106; match to protein family HMM PF00109; match to protein family HMM PF00550; match to protein family HMM PF00698; match to protein family HMM PF02801.	Amino acid adenylation; Identified by match to protein family HMM PF00501; match to protein family HMM PF00550; match to protein family HMM PF00668; match to protein family HMM PF00975; match to protein family HMM TIGR01720; match to protein family HMM TIGR01733.	0.997
ABK70529.1	pks	MSMEG_6767	MSMEG_0408	Mycocerosic acid synthase; Identified by match to protein family HMM PF00106; match to protein family HMM PF00109; match to protein family HMM PF00550; match to protein family HMM PF00698; match to protein family HMM PF02801.	Type I modular polyketide synthase; Identified by match to protein family HMM PF00106; match to protein family HMM PF00107; match to protein family HMM PF00109; match to protein family HMM PF00550; match to protein family HMM PF00698; match to protein family HMM PF01370; match to protein family HMM PF02801.	0.966
ABK70529.1	pks5	MSMEG_6767	MSMEG_4727	Mycocerosic acid synthase; Identified by match to protein family HMM PF00106; match to protein family HMM PF00109; match to protein family HMM PF00550; match to protein family HMM PF00698; match to protein family HMM PF02801.	Mycocerosic acid synthase; Polyketide synthase involved in the biosynthesis of 2,4- dimethyl-2-eicosenoic acid, a lipid component of the lipooligosaccharides (LOS) which are not located at the bacterial surface but rather in deeper compartments of the cell envelope of M.smegmatis.	0.903
ABK70529.1	rplF	MSMEG_6767	MSMEG_1470	Mycocerosic acid synthase; Identified by match to protein family HMM PF00106; match to protein family HMM PF00109; match to protein family HMM PF00550; match to protein family HMM PF00698; match to protein family HMM PF02801.	50S ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family.	0.411
ABK70948.1	ABK70529.1	MSMEG_0718	MSMEG_6767	acetyl-CoA synthetase; Identified by match to protein family HMM PF00501.	Mycocerosic acid synthase; Identified by match to protein family HMM PF00106; match to protein family HMM PF00109; match to protein family HMM PF00550; match to protein family HMM PF00698; match to protein family HMM PF02801.	0.478
ABK70948.1	ABK72346.1	MSMEG_0718	MSMEG_4036	acetyl-CoA synthetase; Identified by match to protein family HMM PF00501.	crotonobetaine/carnitine-CoA ligase; Identified by match to protein family HMM PF00501.	0.627
ABK70948.1	ABK73027.1	MSMEG_0718	MSMEG_3986	acetyl-CoA synthetase; Identified by match to protein family HMM PF00501.	Acetyl-coenzyme A synthetase; Identified by match to protein family HMM PF00501.	0.937
ABK70948.1	ABK73320.1	MSMEG_0718	MSMEG_4035	acetyl-CoA synthetase; Identified by match to protein family HMM PF00501.	Citrate synthase; Belongs to the citrate synthase family.	0.952
ABK70948.1	pks	MSMEG_0718	MSMEG_0408	acetyl-CoA synthetase; Identified by match to protein family HMM PF00501.	Type I modular polyketide synthase; Identified by match to protein family HMM PF00106; match to protein family HMM PF00107; match to protein family HMM PF00109; match to protein family HMM PF00550; match to protein family HMM PF00698; match to protein family HMM PF01370; match to protein family HMM PF02801.	0.503
ABK70948.1	pks5	MSMEG_0718	MSMEG_4727	acetyl-CoA synthetase; Identified by match to protein family HMM PF00501.	Mycocerosic acid synthase; Polyketide synthase involved in the biosynthesis of 2,4- dimethyl-2-eicosenoic acid, a lipid component of the lipooligosaccharides (LOS) which are not located at the bacterial surface but rather in deeper compartments of the cell envelope of M.smegmatis.	0.461
ABK71464.1	ABK72346.1	MSMEG_4037	MSMEG_4036	Hypothetical protein; Identified by Glimmer2; putative.	crotonobetaine/carnitine-CoA ligase; Identified by match to protein family HMM PF00501.	0.608
ABK71464.1	ABK73320.1	MSMEG_4037	MSMEG_4035	Hypothetical protein; Identified by Glimmer2; putative.	Citrate synthase; Belongs to the citrate synthase family.	0.609
ABK71774.1	ABK70529.1	MSMEG_6392	MSMEG_6767	Polyketide synthase; Identified by match to protein family HMM PF00109; match to protein family HMM PF00550; match to protein family HMM PF00698; match to protein family HMM PF00975; match to protein family HMM PF02801.	Mycocerosic acid synthase; Identified by match to protein family HMM PF00106; match to protein family HMM PF00109; match to protein family HMM PF00550; match to protein family HMM PF00698; match to protein family HMM PF02801.	0.964
ABK71774.1	ABK72346.1	MSMEG_6392	MSMEG_4036	Polyketide synthase; Identified by match to protein family HMM PF00109; match to protein family HMM PF00550; match to protein family HMM PF00698; match to protein family HMM PF00975; match to protein family HMM PF02801.	crotonobetaine/carnitine-CoA ligase; Identified by match to protein family HMM PF00501.	0.735
ABK71774.1	ABK72398.1	MSMEG_6392	MSMEG_0019	Polyketide synthase; Identified by match to protein family HMM PF00109; match to protein family HMM PF00550; match to protein family HMM PF00698; match to protein family HMM PF00975; match to protein family HMM PF02801.	Amino acid adenylation; Identified by match to protein family HMM PF00501; match to protein family HMM PF00550; match to protein family HMM PF00668; match to protein family HMM PF00975; match to protein family HMM TIGR01720; match to protein family HMM TIGR01733.	0.997
ABK71774.1	pks	MSMEG_6392	MSMEG_0408	Polyketide synthase; Identified by match to protein family HMM PF00109; match to protein family HMM PF00550; match to protein family HMM PF00698; match to protein family HMM PF00975; match to protein family HMM PF02801.	Type I modular polyketide synthase; Identified by match to protein family HMM PF00106; match to protein family HMM PF00107; match to protein family HMM PF00109; match to protein family HMM PF00550; match to protein family HMM PF00698; match to protein family HMM PF01370; match to protein family HMM PF02801.	0.990
ABK71774.1	pks5	MSMEG_6392	MSMEG_4727	Polyketide synthase; Identified by match to protein family HMM PF00109; match to protein family HMM PF00550; match to protein family HMM PF00698; match to protein family HMM PF00975; match to protein family HMM PF02801.	Mycocerosic acid synthase; Polyketide synthase involved in the biosynthesis of 2,4- dimethyl-2-eicosenoic acid, a lipid component of the lipooligosaccharides (LOS) which are not located at the bacterial surface but rather in deeper compartments of the cell envelope of M.smegmatis.	0.968