Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ABK71037.1 | ABK71883.1 | MSMEG_3318 | MSMEG_2006 | Oxidoreductase; Identified by match to protein family HMM PF01494. | 2,3-dihydroxybiphenyl 1,2-dioxygenase; Identified by match to protein family HMM PF00903. | 0.450 |
| ABK71037.1 | ABK73132.1 | MSMEG_3318 | MSMEG_4043 | Oxidoreductase; Identified by match to protein family HMM PF01494. | Amidohydrolase 2; Identified by match to protein family HMM PF04909. | 0.402 |
| ABK71883.1 | ABK71037.1 | MSMEG_2006 | MSMEG_3318 | 2,3-dihydroxybiphenyl 1,2-dioxygenase; Identified by match to protein family HMM PF00903. | Oxidoreductase; Identified by match to protein family HMM PF01494. | 0.450 |
| ABK71883.1 | ABK72899.1 | MSMEG_2006 | MSMEG_6487 | 2,3-dihydroxybiphenyl 1,2-dioxygenase; Identified by match to protein family HMM PF00903. | 2-hydroxy-3-carboxy-6-oxo-7-methylocta-2, 4-dienoate decarboxylase; Identified by match to protein family HMM PF04909. | 0.426 |
| ABK71883.1 | ABK73132.1 | MSMEG_2006 | MSMEG_4043 | 2,3-dihydroxybiphenyl 1,2-dioxygenase; Identified by match to protein family HMM PF00903. | Amidohydrolase 2; Identified by match to protein family HMM PF04909. | 0.526 |
| ABK71883.1 | ABK73340.1 | MSMEG_2006 | MSMEG_3039 | 2,3-dihydroxybiphenyl 1,2-dioxygenase; Identified by match to protein family HMM PF00903. | Monooxygenase; Identified by match to protein family HMM PF01266; match to protein family HMM PF01494. | 0.404 |
| ABK71883.1 | ABK75057.1 | MSMEG_2006 | MSMEG_1308 | 2,3-dihydroxybiphenyl 1,2-dioxygenase; Identified by match to protein family HMM PF00903. | Peptidase S15; Identified by match to protein family HMM PF02129; match to protein family HMM TIGR00976. | 0.553 |
| ABK72899.1 | ABK71883.1 | MSMEG_6487 | MSMEG_2006 | 2-hydroxy-3-carboxy-6-oxo-7-methylocta-2, 4-dienoate decarboxylase; Identified by match to protein family HMM PF04909. | 2,3-dihydroxybiphenyl 1,2-dioxygenase; Identified by match to protein family HMM PF00903. | 0.426 |
| ABK72899.1 | ABK73132.1 | MSMEG_6487 | MSMEG_4043 | 2-hydroxy-3-carboxy-6-oxo-7-methylocta-2, 4-dienoate decarboxylase; Identified by match to protein family HMM PF04909. | Amidohydrolase 2; Identified by match to protein family HMM PF04909. | 0.771 |
| ABK72899.1 | ABK73446.1 | MSMEG_6487 | MSMEG_6489 | 2-hydroxy-3-carboxy-6-oxo-7-methylocta-2, 4-dienoate decarboxylase; Identified by match to protein family HMM PF04909. | 2,6-dihydroxypyridine hydroxylase; Identified by match to protein family HMM PF01494. | 0.833 |
| ABK73132.1 | ABK71037.1 | MSMEG_4043 | MSMEG_3318 | Amidohydrolase 2; Identified by match to protein family HMM PF04909. | Oxidoreductase; Identified by match to protein family HMM PF01494. | 0.402 |
| ABK73132.1 | ABK71883.1 | MSMEG_4043 | MSMEG_2006 | Amidohydrolase 2; Identified by match to protein family HMM PF04909. | 2,3-dihydroxybiphenyl 1,2-dioxygenase; Identified by match to protein family HMM PF00903. | 0.526 |
| ABK73132.1 | ABK72899.1 | MSMEG_4043 | MSMEG_6487 | Amidohydrolase 2; Identified by match to protein family HMM PF04909. | 2-hydroxy-3-carboxy-6-oxo-7-methylocta-2, 4-dienoate decarboxylase; Identified by match to protein family HMM PF04909. | 0.771 |
| ABK73132.1 | ABK73340.1 | MSMEG_4043 | MSMEG_3039 | Amidohydrolase 2; Identified by match to protein family HMM PF04909. | Monooxygenase; Identified by match to protein family HMM PF01266; match to protein family HMM PF01494. | 0.434 |
| ABK73132.1 | ABK73446.1 | MSMEG_4043 | MSMEG_6489 | Amidohydrolase 2; Identified by match to protein family HMM PF04909. | 2,6-dihydroxypyridine hydroxylase; Identified by match to protein family HMM PF01494. | 0.416 |
| ABK73132.1 | ABK73791.1 | MSMEG_4043 | MSMEG_2254 | Amidohydrolase 2; Identified by match to protein family HMM PF04909. | Oxalate decarboxylase OxdC, putative; Identified by match to protein family HMM PF00190; match to protein family HMM PF07883. | 0.507 |
| ABK73132.1 | ABK74068.1 | MSMEG_4043 | MSMEG_4042 | Amidohydrolase 2; Identified by match to protein family HMM PF04909. | Transcriptional regulator, GntR family protein; Identified by match to protein family HMM PF00392; match to protein family HMM PF07729. | 0.714 |
| ABK73132.1 | ABK74649.1 | MSMEG_4043 | MSMEG_4041 | Amidohydrolase 2; Identified by match to protein family HMM PF04909. | Hydroxyquinol 1,2-dioxygenase; Identified by match to protein family HMM PF00775; match to protein family HMM PF04444. | 0.567 |
| ABK73132.1 | ABK75057.1 | MSMEG_4043 | MSMEG_1308 | Amidohydrolase 2; Identified by match to protein family HMM PF04909. | Peptidase S15; Identified by match to protein family HMM PF02129; match to protein family HMM TIGR00976. | 0.502 |
| ABK73340.1 | ABK71883.1 | MSMEG_3039 | MSMEG_2006 | Monooxygenase; Identified by match to protein family HMM PF01266; match to protein family HMM PF01494. | 2,3-dihydroxybiphenyl 1,2-dioxygenase; Identified by match to protein family HMM PF00903. | 0.404 |
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