STRINGSTRING
ABK76203.1 ABK76203.1 ABK73396.1 ABK73396.1 ABK71450.1 ABK71450.1 ABK75332.1 ABK75332.1 ABK70493.1 ABK70493.1 ABK76139.1 ABK76139.1 ABK74628.1 ABK74628.1 ABK73179.1 ABK73179.1 ABK72215.1 ABK72215.1 ABK74844.1 ABK74844.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK76203.1Identified by match to protein family HMM PF02629. (687 aa)    
Predicted Functional Partners:
ABK73396.1
Peroxisomal trans-2-enoyl-CoA reductase; Identified by match to protein family HMM PF00106.
  
    0.803
ABK71450.1
enoyl-CoA hydratase; Identified by match to protein family HMM PF00378.
  
  
 0.752
ABK75332.1
butyryl-CoA dehydrogenase; Identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF08028.
  
    0.732
ABK70493.1
Hypothetical metabolite transport protein YaaU; Identified by match to protein family HMM PF00083; match to protein family HMM PF07690.
  
    0.725
ABK76139.1
Pyruvate synthase; Identified by match to protein family HMM PF01855.
  
 
 0.617
ABK74628.1
Histone deacetylase superfamily protein; Identified by match to protein family HMM PF00850.
 
    0.518
ABK73179.1
Pyruvate ferredoxin/flavodoxin oxidoreductase family protein; Identified by match to protein family HMM PF01558.
  
 
 0.497
ABK72215.1
Fumarate hydratase class I, anaerobic; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family.
  
  
 0.412
ABK74844.1
Conserved hypothetical protein; Identified by match to protein family HMM PF01796.
 
  
 0.401
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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