Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABK69647.1 | ABK71015.1 | MSMEG_4085 | MSMEG_4084 | Nitrilotriacetate monooxygenase component A. | Putative acyl-CoA dehydrogenase; Identified by match to protein family HMM PF02770; match to protein family HMM PF08028. | 0.692 |
ABK69647.1 | ABK71744.1 | MSMEG_4085 | MSMEG_4103 | Nitrilotriacetate monooxygenase component A. | Alkanesulfonate monooxygenase; Identified by match to protein family HMM PF00296. | 0.557 |
ABK69647.1 | ABK72493.1 | MSMEG_4085 | MSMEG_4083 | Nitrilotriacetate monooxygenase component A. | Putative monooxygenase. | 0.691 |
ABK69647.1 | ABK72768.1 | MSMEG_4085 | MSMEG_1159 | Nitrilotriacetate monooxygenase component A. | ABC transporter component A. | 0.430 |
ABK69647.1 | ABK73252.1 | MSMEG_4085 | MSMEG_4087 | Nitrilotriacetate monooxygenase component A. | Major facilitator superfamily protein; Identified by match to protein family HMM PF00083; match to protein family HMM PF07690. | 0.582 |
ABK69647.1 | ABK73605.1 | MSMEG_4085 | MSMEG_2800 | Nitrilotriacetate monooxygenase component A. | NADPH-dependent fmn reductase; Identified by match to protein family HMM PF03358. | 0.582 |
ABK69647.1 | ABK73619.1 | MSMEG_4085 | MSMEG_4082 | Nitrilotriacetate monooxygenase component A. | Monoxygenase. | 0.708 |
ABK69647.1 | ssuD-3 | MSMEG_4085 | MSMEG_4086 | Nitrilotriacetate monooxygenase component A. | Nitrilotriacetate monooxygenase component A. | 0.947 |
ABK71015.1 | ABK69647.1 | MSMEG_4084 | MSMEG_4085 | Putative acyl-CoA dehydrogenase; Identified by match to protein family HMM PF02770; match to protein family HMM PF08028. | Nitrilotriacetate monooxygenase component A. | 0.692 |
ABK71015.1 | ABK72493.1 | MSMEG_4084 | MSMEG_4083 | Putative acyl-CoA dehydrogenase; Identified by match to protein family HMM PF02770; match to protein family HMM PF08028. | Putative monooxygenase. | 0.897 |
ABK71015.1 | ABK73252.1 | MSMEG_4084 | MSMEG_4087 | Putative acyl-CoA dehydrogenase; Identified by match to protein family HMM PF02770; match to protein family HMM PF08028. | Major facilitator superfamily protein; Identified by match to protein family HMM PF00083; match to protein family HMM PF07690. | 0.456 |
ABK71015.1 | ABK73619.1 | MSMEG_4084 | MSMEG_4082 | Putative acyl-CoA dehydrogenase; Identified by match to protein family HMM PF02770; match to protein family HMM PF08028. | Monoxygenase. | 0.885 |
ABK71015.1 | ABK75988.1 | MSMEG_4084 | MSMEG_4389 | Putative acyl-CoA dehydrogenase; Identified by match to protein family HMM PF02770; match to protein family HMM PF08028. | Monooxygenase, NtaA/SnaA/SoxA family protein. | 0.590 |
ABK71015.1 | ssuD-3 | MSMEG_4084 | MSMEG_4086 | Putative acyl-CoA dehydrogenase; Identified by match to protein family HMM PF02770; match to protein family HMM PF08028. | Nitrilotriacetate monooxygenase component A. | 0.604 |
ABK71744.1 | ABK69647.1 | MSMEG_4103 | MSMEG_4085 | Alkanesulfonate monooxygenase; Identified by match to protein family HMM PF00296. | Nitrilotriacetate monooxygenase component A. | 0.557 |
ABK71744.1 | ABK73605.1 | MSMEG_4103 | MSMEG_2800 | Alkanesulfonate monooxygenase; Identified by match to protein family HMM PF00296. | NADPH-dependent fmn reductase; Identified by match to protein family HMM PF03358. | 0.952 |
ABK71744.1 | ssuD-3 | MSMEG_4103 | MSMEG_4086 | Alkanesulfonate monooxygenase; Identified by match to protein family HMM PF00296. | Nitrilotriacetate monooxygenase component A. | 0.412 |
ABK71744.1 | ssuD-5 | MSMEG_4103 | MSMEG_4096 | Alkanesulfonate monooxygenase; Identified by match to protein family HMM PF00296. | Nitrilotriacetate monooxygenase component A. | 0.705 |
ABK72493.1 | ABK69647.1 | MSMEG_4083 | MSMEG_4085 | Putative monooxygenase. | Nitrilotriacetate monooxygenase component A. | 0.691 |
ABK72493.1 | ABK71015.1 | MSMEG_4083 | MSMEG_4084 | Putative monooxygenase. | Putative acyl-CoA dehydrogenase; Identified by match to protein family HMM PF02770; match to protein family HMM PF08028. | 0.897 |
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