STRINGSTRING
ssuD-3 ssuD-3 ABK69647.1 ABK69647.1 ssuD-5 ssuD-5 ABK75988.1 ABK75988.1 ABK73619.1 ABK73619.1 ABK72493.1 ABK72493.1 ABK71015.1 ABK71015.1 ABK73252.1 ABK73252.1 ABK73605.1 ABK73605.1 ABK71744.1 ABK71744.1 ABK72768.1 ABK72768.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ssuD-3Nitrilotriacetate monooxygenase component A. (193 aa)    
Predicted Functional Partners:
ABK69647.1
Nitrilotriacetate monooxygenase component A.
 
    0.947
ssuD-5
Nitrilotriacetate monooxygenase component A.
  
     0.774
ABK75988.1
Monooxygenase, NtaA/SnaA/SoxA family protein.
  
    0.772
ABK73619.1
Monoxygenase.
 
   
0.707
ABK72493.1
Putative monooxygenase.
 
   
0.707
ABK71015.1
Putative acyl-CoA dehydrogenase; Identified by match to protein family HMM PF02770; match to protein family HMM PF08028.
  
    0.604
ABK73252.1
Major facilitator superfamily protein; Identified by match to protein family HMM PF00083; match to protein family HMM PF07690.
  
    0.581
ABK73605.1
NADPH-dependent fmn reductase; Identified by match to protein family HMM PF03358.
 
 
 0.558
ABK71744.1
Alkanesulfonate monooxygenase; Identified by match to protein family HMM PF00296.
  
    0.412
ABK72768.1
ABC transporter component A.
 
  
 0.402
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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