STRINGSTRING
ABK74009.1 ABK74009.1 ABK72524.1 ABK72524.1 ABK72471.1 ABK72471.1 ABK71338.1 ABK71338.1 oppC oppC ABK73147.1 ABK73147.1 ABK73087.1 ABK73087.1 ABK69993.1 ABK69993.1 ABK71226.1 ABK71226.1 ABK75513.1 ABK75513.1 ABK71771.1 ABK71771.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK74009.1ABC transporter ATP-binding protein; Identified by match to protein family HMM PF00005; Belongs to the ABC transporter superfamily. (553 aa)    
Predicted Functional Partners:
ABK72524.1
ABC transporter permease protein; Identified by match to protein family HMM PF00528.
  
 0.967
ABK72471.1
ABC transporter permease protein; Identified by match to protein family HMM PF00528.
 
  
 0.957
ABK71338.1
Oligopeptide ABC transporter integral membrane protein; Identified by match to protein family HMM PF00528.
  
 0.882
oppC
ABC transporter, permease protein OppC; Identified by match to protein family HMM PF00528.
  
 0.868
ABK73147.1
ABC-type transporter, substrate binding protein; Identified by match to protein family HMM PF00496.
  
 0.867
ABK73087.1
ABC transporter permease protein; Identified by match to protein family HMM PF00528.
  
 0.861
ABK69993.1
Inner membrane ABC transporter permease protein YddQ; Identified by match to protein family HMM PF00528.
  
 0.855
ABK71226.1
ABC transporter permease protein; Identified by match to protein family HMM PF00528.
  
 0.849
ABK75513.1
ABC transporter permease protein; Identified by match to protein family HMM PF00528.
  
 0.845
ABK71771.1
Hypothetical ABC transporter permease protein YliD; Identified by match to protein family HMM PF00528.
  
 0.837
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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