STRINGSTRING
ABK72322.1 ABK72322.1 ABK75541.1 ABK75541.1 ABK73771.1 ABK73771.1 ABK72982.1 ABK72982.1 hisIE hisIE ABK71511.1 ABK71511.1 argC argC dapF dapF pcaC-2 pcaC-2 pcaC-6 pcaC-6 ABK75299.1 ABK75299.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
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Experiments
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Textmining
[Homology]
Score
ABK72322.13-hydroxyisobutyrate dehydrogenase; Identified by match to protein family HMM PF03446. (299 aa)    
Predicted Functional Partners:
ABK75541.1
6-phosphogluconate dehydrogenase, NAD-binding; Identified by match to protein family HMM PF01210; match to protein family HMM PF03446; match to protein family HMM PF03807.
  
    0.761
ABK73771.1
Oxidoreductase; Identified by match to protein family HMM PF03446; match to protein family HMM PF03807.
  
    0.734
ABK72982.1
3-isopropylmalate dehydrogenase; Identified by match to protein family HMM PF00180.
  
  
 0.707
hisIE
phosphoribosyl-AMP pyrophosphatase/phosphoribosyl-ATP cyclohydrolase; Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP.
  
  
 0.615
ABK71511.1
Conserved hypothetical protein.
  
    0.573
argC
N-acetyl-gamma-glutamyl-phosphate reductase; Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde. Belongs to the NAGSA dehydrogenase family. Type 1 subfamily.
  
  
 0.551
dapF
Diaminopimelate epimerase; Catalyzes the stereoinversion of LL-2,6-diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso-DAP), a precursor of L- lysine and an essential component of the bacterial peptidoglycan.
     
 0.544
pcaC-2
4-carboxymuconolactone decarboxylase domain protein; Identified by match to protein family HMM PF02627.
  
  
 0.424
pcaC-6
4-carboxymuconolactone decarboxylase domain protein; Identified by match to protein family HMM PF02627.
  
  
 0.423
ABK75299.1
Carboxymuconolactone decarboxylase; Identified by match to protein family HMM PF02627.
  
  
 0.420
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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