Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ABK69646.1 | ABK73292.1 | MSMEG_4172 | MSMEG_1373 | D-ribose-binding periplasmic protein RbsB; Identified by match to protein family HMM PF00532. | Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components; Identified by match to protein family HMM PF02653; Belongs to the binding-protein-dependent transport system permease family. | 0.976 |
| ABK69646.1 | ABK74237.1 | MSMEG_4172 | MSMEG_3090 | D-ribose-binding periplasmic protein RbsB; Identified by match to protein family HMM PF00532. | Ribose transport system permease protein RbsC; Identified by match to protein family HMM PF02653; Belongs to the binding-protein-dependent transport system permease family. | 0.975 |
| ABK69646.1 | ABK74263.1 | MSMEG_4172 | MSMEG_4170 | D-ribose-binding periplasmic protein RbsB; Identified by match to protein family HMM PF00532. | Ribose transport ATP-binding protein RbsA; Identified by match to protein family HMM PF00005. | 0.993 |
| ABK69646.1 | ABK75223.1 | MSMEG_4172 | MSMEG_4171 | D-ribose-binding periplasmic protein RbsB; Identified by match to protein family HMM PF00532. | Ribose transport system permease protein RbsC; Identified by match to protein family HMM PF02653; Belongs to the binding-protein-dependent transport system permease family. | 0.993 |
| ABK69646.1 | ABK75364.1 | MSMEG_4172 | MSMEG_3091 | D-ribose-binding periplasmic protein RbsB; Identified by match to protein family HMM PF00532. | Ribose transport ATP-binding protein RbsA; Identified by match to protein family HMM PF00005. | 0.974 |
| ABK69646.1 | ABK75370.1 | MSMEG_4172 | MSMEG_3602 | D-ribose-binding periplasmic protein RbsB; Identified by match to protein family HMM PF00532. | Ribose transport ATP-binding protein RbsA; Identified by match to protein family HMM PF00005. | 0.975 |
| ABK70633.1 | ABK73292.1 | MSMEG_3095 | MSMEG_1373 | D-ribose-binding periplasmic protein; Identified by match to protein family HMM PF00532. | Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components; Identified by match to protein family HMM PF02653; Belongs to the binding-protein-dependent transport system permease family. | 0.975 |
| ABK70633.1 | ABK74237.1 | MSMEG_3095 | MSMEG_3090 | D-ribose-binding periplasmic protein; Identified by match to protein family HMM PF00532. | Ribose transport system permease protein RbsC; Identified by match to protein family HMM PF02653; Belongs to the binding-protein-dependent transport system permease family. | 0.990 |
| ABK70633.1 | ABK74263.1 | MSMEG_3095 | MSMEG_4170 | D-ribose-binding periplasmic protein; Identified by match to protein family HMM PF00532. | Ribose transport ATP-binding protein RbsA; Identified by match to protein family HMM PF00005. | 0.975 |
| ABK70633.1 | ABK75223.1 | MSMEG_3095 | MSMEG_4171 | D-ribose-binding periplasmic protein; Identified by match to protein family HMM PF00532. | Ribose transport system permease protein RbsC; Identified by match to protein family HMM PF02653; Belongs to the binding-protein-dependent transport system permease family. | 0.976 |
| ABK70633.1 | ABK75364.1 | MSMEG_3095 | MSMEG_3091 | D-ribose-binding periplasmic protein; Identified by match to protein family HMM PF00532. | Ribose transport ATP-binding protein RbsA; Identified by match to protein family HMM PF00005. | 0.989 |
| ABK70633.1 | ABK75370.1 | MSMEG_3095 | MSMEG_3602 | D-ribose-binding periplasmic protein; Identified by match to protein family HMM PF00532. | Ribose transport ATP-binding protein RbsA; Identified by match to protein family HMM PF00005. | 0.975 |
| ABK72609.1 | ABK73292.1 | MSMEG_1374 | MSMEG_1373 | Ribose ABC transporter, periplasmic binding protein; Identified by match to protein family HMM PF00532. | Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components; Identified by match to protein family HMM PF02653; Belongs to the binding-protein-dependent transport system permease family. | 0.994 |
| ABK72609.1 | ABK74237.1 | MSMEG_1374 | MSMEG_3090 | Ribose ABC transporter, periplasmic binding protein; Identified by match to protein family HMM PF00532. | Ribose transport system permease protein RbsC; Identified by match to protein family HMM PF02653; Belongs to the binding-protein-dependent transport system permease family. | 0.973 |
| ABK72609.1 | ABK74263.1 | MSMEG_1374 | MSMEG_4170 | Ribose ABC transporter, periplasmic binding protein; Identified by match to protein family HMM PF00532. | Ribose transport ATP-binding protein RbsA; Identified by match to protein family HMM PF00005. | 0.960 |
| ABK72609.1 | ABK75223.1 | MSMEG_1374 | MSMEG_4171 | Ribose ABC transporter, periplasmic binding protein; Identified by match to protein family HMM PF00532. | Ribose transport system permease protein RbsC; Identified by match to protein family HMM PF02653; Belongs to the binding-protein-dependent transport system permease family. | 0.974 |
| ABK72609.1 | ABK75364.1 | MSMEG_1374 | MSMEG_3091 | Ribose ABC transporter, periplasmic binding protein; Identified by match to protein family HMM PF00532. | Ribose transport ATP-binding protein RbsA; Identified by match to protein family HMM PF00005. | 0.958 |
| ABK72609.1 | ABK75370.1 | MSMEG_1374 | MSMEG_3602 | Ribose ABC transporter, periplasmic binding protein; Identified by match to protein family HMM PF00532. | Ribose transport ATP-binding protein RbsA; Identified by match to protein family HMM PF00005. | 0.961 |
| ABK72609.1 | thpA | MSMEG_1374 | MSMEG_3599 | Ribose ABC transporter, periplasmic binding protein; Identified by match to protein family HMM PF00532. | Sugar-binding transcriptional regulator, LacI family protein; Part of an ABC transporter complex involved in D-threitol import. Binds D-threitol. Functions in the transport for the degradation pathway of D-threitol, that allows M.smegmatis to grow on this compound as the sole carbon source; Belongs to the bacterial solute-binding protein 2 family. | 0.735 |
| ABK72609.1 | xypA | MSMEG_1374 | MSMEG_3598 | Ribose ABC transporter, periplasmic binding protein; Identified by match to protein family HMM PF00532. | Periplasmic sugar-binding proteins; Part of an ABC transporter complex likely involved in xylitol import. Binds xylitol. | 0.737 |
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