STRINGSTRING
ABK73383.1 ABK73383.1 ABK70706.1 ABK70706.1 ABK74347.1 ABK74347.1 cysS cysS ABK75130.1 ABK75130.1 ABK73569.1 ABK73569.1 sdhA sdhA SdhA SdhA ABK73930.1 ABK73930.1 ABK71760.1 ABK71760.1 ABK75934.1 ABK75934.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK73383.1Conserved hypothetical protein; Identified by match to protein family HMM PF06742; match to protein family HMM PF06863. (485 aa)    
Predicted Functional Partners:
ABK70706.1
Probable exported protein.
   
  
 0.822
ABK74347.1
Short chain dehydrogenase; Identified by match to protein family HMM PF00106; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
    0.776
cysS
cysteinyl-tRNA synthetase; Catalyzes the ATP-dependent condensation of GlcN-Ins and L- cysteine to form L-Cys-GlcN-Ins.
       0.708
ABK75130.1
Arylsulfatase; Identified by match to protein family HMM PF00884.
 
    0.670
ABK73569.1
Choloylglycine hydrolase, putative; Identified by match to protein family HMM PF02275.
 
    0.614
sdhA
Succinate dehydrogenase, flavoprotein subunit; Identified by similarity to SP:P31038; match to protein family HMM PF00890; match to protein family HMM PF02910; match to protein family HMM TIGR01812; match to protein family HMM TIGR01816.
   
  
 0.594
SdhA
Succinate dehydrogenase flavoprotein subunit; Identified by match to protein family HMM PF00890; match to protein family HMM PF02910; match to protein family HMM PF07992.
      
 0.589
ABK73930.1
Sulfatase; Identified by match to protein family HMM PF00884.
 
     0.579
ABK71760.1
3-ketosteroid-delta4; Identified by match to protein family HMM PF00890; match to protein family HMM PF01266.
   
  
 0.526
ABK75934.1
DNA-binding protein.
   
  
 0.516
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
Server load: low (22%) [HD]