STRINGSTRING
ABK74347.1 ABK74347.1 ABK73383.1 ABK73383.1 cysS cysS ABK71331.1 ABK71331.1 ABK73976.1 ABK73976.1 ABK75128.1 ABK75128.1 ABK70201.1 ABK70201.1 ABK74871.1 ABK74871.1 ABK70903.1 ABK70903.1 ABK72413.1 ABK72413.1 ABK74223.1 ABK74223.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK74347.1Short chain dehydrogenase; Identified by match to protein family HMM PF00106; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (295 aa)    
Predicted Functional Partners:
ABK73383.1
Conserved hypothetical protein; Identified by match to protein family HMM PF06742; match to protein family HMM PF06863.
  
    0.776
cysS
cysteinyl-tRNA synthetase; Catalyzes the ATP-dependent condensation of GlcN-Ins and L- cysteine to form L-Cys-GlcN-Ins.
       0.732
ABK71331.1
Short-chain dehydrogenase/reductase SDR; Identified by match to protein family HMM PF00106.
 
    0.692
ABK73976.1
3-oxoacyl-[acyl-carrier-protein] reductase; Identified by match to protein family HMM PF00106; match to protein family HMM PF01370.
 
    0.672
ABK75128.1
3-oxoacyl-[acyl-carrier-protein] reductase; Identified by match to protein family HMM PF00106; match to protein family HMM PF01370.
 
    0.659
ABK70201.1
3-oxoacyl-[acyl-carrier-protein] reductase; Identified by match to protein family HMM PF00106; match to protein family HMM PF01370.
 
    0.637
ABK74871.1
3-oxoacyl-[acyl-carrier-protein] reductase; Identified by match to protein family HMM PF00106.
 
    0.636
ABK70903.1
acetoacetyl-CoA reductase.
 
    0.561
ABK72413.1
Short chain dehydrogenase; Identified by match to protein family HMM PF00106; match to protein family HMM PF01370.
 
    0.550
ABK74223.1
Short chain dehydrogenase; Identified by match to protein family HMM PF00106.
 
    0.545
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
Server load: low (10%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.