Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABK69526.1 | ABK70706.1 | MSMEG_4196 | MSMEG_5785 | LppL protein. | Probable exported protein. | 0.760 |
ABK69526.1 | ABK70832.1 | MSMEG_4196 | MSMEG_0834 | LppL protein. | Tuberculin related peptide. | 0.763 |
ABK69526.1 | ABK72379.1 | MSMEG_4196 | MSMEG_0959 | LppL protein. | Putative conserved transmembrane protein. | 0.756 |
ABK69526.1 | ABK73297.1 | MSMEG_4196 | MSMEG_5468 | LppL protein. | Conserved hypothetical protein. | 0.775 |
ABK69526.1 | ABK74620.1 | MSMEG_4196 | MSMEG_5225 | LppL protein. | Conserved hypothetical protein. | 0.762 |
ABK69526.1 | ABK74693.1 | MSMEG_4196 | MSMEG_1929 | LppL protein. | Conserved hypothetical protein. | 0.798 |
ABK69526.1 | ABK74778.1 | MSMEG_4196 | MSMEG_1110 | LppL protein. | Probable conserved transmembrane protein. | 0.771 |
ABK69526.1 | ABK75765.1 | MSMEG_4196 | MSMEG_2696 | LppL protein. | Putative conserved membrane alanine rich protein. | 0.769 |
ABK69526.1 | ABK75783.1 | MSMEG_4196 | MSMEG_4197 | LppL protein. | Conserved hypothetical protein. | 0.932 |
ABK69526.1 | pyrD | MSMEG_4196 | MSMEG_4198 | LppL protein. | Dihydroorotate oxidase; Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily. | 0.896 |
ABK70706.1 | ABK69526.1 | MSMEG_5785 | MSMEG_4196 | Probable exported protein. | LppL protein. | 0.760 |
ABK70706.1 | ABK70832.1 | MSMEG_5785 | MSMEG_0834 | Probable exported protein. | Tuberculin related peptide. | 0.744 |
ABK70706.1 | ABK72379.1 | MSMEG_5785 | MSMEG_0959 | Probable exported protein. | Putative conserved transmembrane protein. | 0.655 |
ABK70706.1 | ABK73297.1 | MSMEG_5785 | MSMEG_5468 | Probable exported protein. | Conserved hypothetical protein. | 0.769 |
ABK70706.1 | ABK74620.1 | MSMEG_5785 | MSMEG_5225 | Probable exported protein. | Conserved hypothetical protein. | 0.768 |
ABK70706.1 | ABK74693.1 | MSMEG_5785 | MSMEG_1929 | Probable exported protein. | Conserved hypothetical protein. | 0.766 |
ABK70706.1 | ABK74778.1 | MSMEG_5785 | MSMEG_1110 | Probable exported protein. | Probable conserved transmembrane protein. | 0.770 |
ABK70706.1 | ABK75765.1 | MSMEG_5785 | MSMEG_2696 | Probable exported protein. | Putative conserved membrane alanine rich protein. | 0.764 |
ABK70832.1 | ABK69526.1 | MSMEG_0834 | MSMEG_4196 | Tuberculin related peptide. | LppL protein. | 0.763 |
ABK70832.1 | ABK70706.1 | MSMEG_0834 | MSMEG_5785 | Tuberculin related peptide. | Probable exported protein. | 0.744 |
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