Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABK70080.1 | ABK72968.1 | MSMEG_1001 | MSMEG_4204 | Acetyltransferase, gnat family protein, putative; Identified by match to protein family HMM PF00583. | Catalase. | 0.522 |
ABK70080.1 | ABK73346.1 | MSMEG_1001 | MSMEG_6324 | Acetyltransferase, gnat family protein, putative; Identified by match to protein family HMM PF00583. | Peroxidase; Identified by match to protein family HMM PF03098. | 0.510 |
ABK72968.1 | ABK70080.1 | MSMEG_4204 | MSMEG_1001 | Catalase. | Acetyltransferase, gnat family protein, putative; Identified by match to protein family HMM PF00583. | 0.522 |
ABK72968.1 | ABK72970.1 | MSMEG_4204 | MSMEG_2481 | Catalase. | Conserved hypothetical protein. | 0.515 |
ABK72968.1 | ABK73274.1 | MSMEG_4204 | MSMEG_4982 | Catalase. | Conserved hypothetical protein. | 0.466 |
ABK72968.1 | ABK73346.1 | MSMEG_4204 | MSMEG_6324 | Catalase. | Peroxidase; Identified by match to protein family HMM PF03098. | 0.599 |
ABK72968.1 | ABK73937.1 | MSMEG_4204 | MSMEG_4205 | Catalase. | Putative transcriptional regulator; Identified by match to protein family HMM PF00196; match to protein family HMM PF07721. | 0.749 |
ABK72968.1 | ABK74728.1 | MSMEG_4204 | MSMEG_6636 | Catalase. | [Mn] superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family. | 0.550 |
ABK72968.1 | ABK74950.1 | MSMEG_4204 | MSMEG_4202 | Catalase. | Conserved hypothetical protein. | 0.680 |
ABK72968.1 | ABK75805.1 | MSMEG_4204 | MSMEG_4203 | Catalase. | Peptidase S8 and S53, subtilisin, kexin, sedolisin; Identified by match to protein family HMM PF00082. | 0.717 |
ABK72968.1 | sodA | MSMEG_4204 | MSMEG_6427 | Catalase. | [Mn] superoxide dismutase; Destroys superoxide anion radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family. | 0.552 |
ABK72968.1 | sodC | MSMEG_4204 | MSMEG_0835 | Catalase. | Copper/zinc superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the Cu-Zn superoxide dismutase family. | 0.543 |
ABK72970.1 | ABK72968.1 | MSMEG_2481 | MSMEG_4204 | Conserved hypothetical protein. | Catalase. | 0.515 |
ABK72970.1 | ABK73346.1 | MSMEG_2481 | MSMEG_6324 | Conserved hypothetical protein. | Peroxidase; Identified by match to protein family HMM PF03098. | 0.617 |
ABK72970.1 | ABK75805.1 | MSMEG_2481 | MSMEG_4203 | Conserved hypothetical protein. | Peptidase S8 and S53, subtilisin, kexin, sedolisin; Identified by match to protein family HMM PF00082. | 0.430 |
ABK73274.1 | ABK72968.1 | MSMEG_4982 | MSMEG_4204 | Conserved hypothetical protein. | Catalase. | 0.466 |
ABK73346.1 | ABK70080.1 | MSMEG_6324 | MSMEG_1001 | Peroxidase; Identified by match to protein family HMM PF03098. | Acetyltransferase, gnat family protein, putative; Identified by match to protein family HMM PF00583. | 0.510 |
ABK73346.1 | ABK72968.1 | MSMEG_6324 | MSMEG_4204 | Peroxidase; Identified by match to protein family HMM PF03098. | Catalase. | 0.599 |
ABK73346.1 | ABK72970.1 | MSMEG_6324 | MSMEG_2481 | Peroxidase; Identified by match to protein family HMM PF03098. | Conserved hypothetical protein. | 0.617 |
ABK73346.1 | ABK73937.1 | MSMEG_6324 | MSMEG_4205 | Peroxidase; Identified by match to protein family HMM PF03098. | Putative transcriptional regulator; Identified by match to protein family HMM PF00196; match to protein family HMM PF07721. | 0.506 |
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