STRINGSTRING
ABK73353.1 ABK73353.1 atpB atpB ABK73961.1 ABK73961.1 ABK76005.1 ABK76005.1 ABK75644.1 ABK75644.1 ABK70706.1 ABK70706.1 ABK70832.1 ABK70832.1 ABK71698.1 ABK71698.1 ABK75453.1 ABK75453.1 ABK72068.1 ABK72068.1 ABK70648.1 ABK70648.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK73353.1LppM protein. (231 aa)    
Predicted Functional Partners:
atpB
ATP synthase F0, A subunit; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane.
   
  
 0.780
ABK73961.1
Conserved hypothetical protein; Identified by match to protein family HMM TIGR02569.
 
    0.751
ABK76005.1
Conserved hypothetical protein.
 
    0.745
ABK75644.1
Conserved hypothetical protein.
  
    0.745
ABK70706.1
Probable exported protein.
  
    0.736
ABK70832.1
Tuberculin related peptide.
  
    0.732
ABK71698.1
Conserved hypothetical protein.
  
    0.728
ABK75453.1
Possible conserved integral membrane protein.
 
    0.717
ABK72068.1
Conserved hypothetical protein.
  
    0.716
ABK70648.1
Heparin-binding hemagglutinin.
  
     0.714
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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