node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABK70694.1 | ABK70725.1 | MSMEG_4240 | MSMEG_2346 | Polyprenyl synthetase; Identified by match to protein family HMM PF00348; Belongs to the FPP/GGPP synthase family. | Phytoene synthase; Identified by match to protein family HMM PF00494. | 0.972 |
ABK70694.1 | ABK72053.1 | MSMEG_4240 | MSMEG_1133 | Polyprenyl synthetase; Identified by match to protein family HMM PF00348; Belongs to the FPP/GGPP synthase family. | Bifunctional short chain isoprenyl diphosphate synthase; Identified by match to protein family HMM PF00348; Belongs to the FPP/GGPP synthase family. | 0.930 |
ABK70694.1 | ABK73353.1 | MSMEG_4240 | MSMEG_4239 | Polyprenyl synthetase; Identified by match to protein family HMM PF00348; Belongs to the FPP/GGPP synthase family. | LppM protein. | 0.671 |
ABK70694.1 | ABK74949.1 | MSMEG_4240 | MSMEG_2347 | Polyprenyl synthetase; Identified by match to protein family HMM PF00348; Belongs to the FPP/GGPP synthase family. | Phytoene dehydrogenase; Identified by match to protein family HMM PF01266; match to protein family HMM PF01593; match to protein family HMM TIGR02734. | 0.804 |
ABK70694.1 | ABK75453.1 | MSMEG_4240 | MSMEG_4241 | Polyprenyl synthetase; Identified by match to protein family HMM PF00348; Belongs to the FPP/GGPP synthase family. | Possible conserved integral membrane protein. | 0.847 |
ABK70694.1 | dxs | MSMEG_4240 | MSMEG_2776 | Polyprenyl synthetase; Identified by match to protein family HMM PF00348; Belongs to the FPP/GGPP synthase family. | 1-deoxy-D-xylulose-5-phosphate synthase; Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D- xylulose-5-phosphate (DXP); Belongs to the transketolase family. DXPS subfamily. | 0.739 |
ABK70694.1 | fni | MSMEG_4240 | MSMEG_1057 | Polyprenyl synthetase; Identified by match to protein family HMM PF00348; Belongs to the FPP/GGPP synthase family. | Isopentenyl-diphosphate delta-isomerase, type 2; Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP). | 0.916 |
ABK70694.1 | ispH | MSMEG_4240 | MSMEG_5224 | Polyprenyl synthetase; Identified by match to protein family HMM PF00348; Belongs to the FPP/GGPP synthase family. | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase; Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP/MEP pathway for isoprenoid precursor biosynthesis. Belongs to the IspH family. | 0.952 |
ABK70694.1 | uppS | MSMEG_4240 | MSMEG_4490 | Polyprenyl synthetase; Identified by match to protein family HMM PF00348; Belongs to the FPP/GGPP synthase family. | Undecaprenyl diphosphate synthase; Catalyzes the sequential condensation of isopentenyl diphosphate (IPP) in the cis configuration with (2Z,6E)-farnesyl diphosphate (Z-FPP or EZ-FPP) generating the 50 carbon product trans,polycis-decaprenyl diphosphate. When (2E,6E)-farnesyl diphosphate (E-FPP or EE-FPP) is used in vitro, both primary products decaprenyl diphosphate and heptaprenyl diphosphate are synthesized. It is probably due to the fact that M.smegmatis synthesizes both (2E,6E,10E)- geranylgeranyl diphosphate (EEE-GGPP) and (2E,6E,10Z)-geranylgeranyl diphosphate (EEZ-GGPP). Can als [...] | 0.809 |
ABK70694.1 | uppS-2 | MSMEG_4240 | MSMEG_5256 | Polyprenyl synthetase; Identified by match to protein family HMM PF00348; Belongs to the FPP/GGPP synthase family. | Undecaprenyl diphosphate synthase; Catalyzes the condensation of only one isopentenyl pyrophosphate (IPP) unit in the cis configuration to E-geranyl diphosphate (E-GPP) generating the 15 carbon product (2Z,6E)-farnesyl diphosphate (Z-FPP or EZ-FPP). Z-FPP is the precursor of decaprenyl diphosphate, which has a central role in the biosynthesis of the mycobacterial cell wall. | 0.976 |
ABK70725.1 | ABK70694.1 | MSMEG_2346 | MSMEG_4240 | Phytoene synthase; Identified by match to protein family HMM PF00494. | Polyprenyl synthetase; Identified by match to protein family HMM PF00348; Belongs to the FPP/GGPP synthase family. | 0.972 |
ABK70725.1 | ABK72053.1 | MSMEG_2346 | MSMEG_1133 | Phytoene synthase; Identified by match to protein family HMM PF00494. | Bifunctional short chain isoprenyl diphosphate synthase; Identified by match to protein family HMM PF00348; Belongs to the FPP/GGPP synthase family. | 0.953 |
ABK70725.1 | ABK74949.1 | MSMEG_2346 | MSMEG_2347 | Phytoene synthase; Identified by match to protein family HMM PF00494. | Phytoene dehydrogenase; Identified by match to protein family HMM PF01266; match to protein family HMM PF01593; match to protein family HMM TIGR02734. | 0.999 |
ABK70725.1 | ABK75453.1 | MSMEG_2346 | MSMEG_4241 | Phytoene synthase; Identified by match to protein family HMM PF00494. | Possible conserved integral membrane protein. | 0.478 |
ABK70725.1 | dxs | MSMEG_2346 | MSMEG_2776 | Phytoene synthase; Identified by match to protein family HMM PF00494. | 1-deoxy-D-xylulose-5-phosphate synthase; Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D- xylulose-5-phosphate (DXP); Belongs to the transketolase family. DXPS subfamily. | 0.577 |
ABK70725.1 | fni | MSMEG_2346 | MSMEG_1057 | Phytoene synthase; Identified by match to protein family HMM PF00494. | Isopentenyl-diphosphate delta-isomerase, type 2; Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP). | 0.421 |
ABK70725.1 | ispH | MSMEG_2346 | MSMEG_5224 | Phytoene synthase; Identified by match to protein family HMM PF00494. | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase; Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP/MEP pathway for isoprenoid precursor biosynthesis. Belongs to the IspH family. | 0.551 |
ABK70725.1 | uppS-2 | MSMEG_2346 | MSMEG_5256 | Phytoene synthase; Identified by match to protein family HMM PF00494. | Undecaprenyl diphosphate synthase; Catalyzes the condensation of only one isopentenyl pyrophosphate (IPP) unit in the cis configuration to E-geranyl diphosphate (E-GPP) generating the 15 carbon product (2Z,6E)-farnesyl diphosphate (Z-FPP or EZ-FPP). Z-FPP is the precursor of decaprenyl diphosphate, which has a central role in the biosynthesis of the mycobacterial cell wall. | 0.443 |
ABK72053.1 | ABK70694.1 | MSMEG_1133 | MSMEG_4240 | Bifunctional short chain isoprenyl diphosphate synthase; Identified by match to protein family HMM PF00348; Belongs to the FPP/GGPP synthase family. | Polyprenyl synthetase; Identified by match to protein family HMM PF00348; Belongs to the FPP/GGPP synthase family. | 0.930 |
ABK72053.1 | ABK70725.1 | MSMEG_1133 | MSMEG_2346 | Bifunctional short chain isoprenyl diphosphate synthase; Identified by match to protein family HMM PF00348; Belongs to the FPP/GGPP synthase family. | Phytoene synthase; Identified by match to protein family HMM PF00494. | 0.953 |