Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ABK69952.1 | ABK70363.1 | MSMEG_2329 | MSMEG_4252 | Methyltransferase, UbiE/COQ5 family protein. | Conserved hypothetical protein. | 0.782 |
| ABK69952.1 | ABK71455.1 | MSMEG_2329 | MSMEG_2349 | Methyltransferase, UbiE/COQ5 family protein. | Glycosyl hydrolase, family protein 57; Identified by match to protein family HMM PF03065; Belongs to the glycosyl hydrolase 57 family. | 0.710 |
| ABK69952.1 | ABK72111.1 | MSMEG_2329 | MSMEG_2350 | Methyltransferase, UbiE/COQ5 family protein. | Conserved hypothetical protein; Probable S-adenosylmethionine-dependent methyltransferase required for the 6-O-methylation of the polysaccharide backbone of 6-O- methylglucosyl lipopolysaccharides (MGLP). Belongs to the methyltransferase superfamily. | 0.801 |
| ABK69952.1 | ABK72142.1 | MSMEG_2329 | MSMEG_1055 | Methyltransferase, UbiE/COQ5 family protein. | Identified by match to protein family HMM PF00132. | 0.782 |
| ABK69952.1 | ABK72817.1 | MSMEG_2329 | MSMEG_2335 | Methyltransferase, UbiE/COQ5 family protein. | Identified by match to protein family HMM PF00132. | 0.782 |
| ABK69952.1 | ABK74249.1 | MSMEG_2329 | MSMEG_1598 | Methyltransferase, UbiE/COQ5 family protein. | Conserved hypothetical protein. | 0.649 |
| ABK69952.1 | octT | MSMEG_2329 | MSMEG_4578 | Methyltransferase, UbiE/COQ5 family protein. | Conserved hypothetical protein; Sugar octanoyltransferase likely involved in the biosynthesis of mycobacterial methylglucose lipopolysaccharide (MGLP). Catalyzes the transfer of an octanoyl group from octanoyl-CoA to the C6 OH of the second glucose in diglucosylglycerate (DGG). DGG is the preferred acceptor, but to a lesser extent, GG (glucosylglycerate) can also be used as substrate. DGG and GG are the two earliest intermediates in MGLP biosynthesis; Belongs to the OctT acyltransferase family. | 0.724 |
| ABK70363.1 | ABK69952.1 | MSMEG_4252 | MSMEG_2329 | Conserved hypothetical protein. | Methyltransferase, UbiE/COQ5 family protein. | 0.782 |
| ABK70363.1 | ABK71455.1 | MSMEG_4252 | MSMEG_2349 | Conserved hypothetical protein. | Glycosyl hydrolase, family protein 57; Identified by match to protein family HMM PF03065; Belongs to the glycosyl hydrolase 57 family. | 0.763 |
| ABK70363.1 | ABK72111.1 | MSMEG_4252 | MSMEG_2350 | Conserved hypothetical protein. | Conserved hypothetical protein; Probable S-adenosylmethionine-dependent methyltransferase required for the 6-O-methylation of the polysaccharide backbone of 6-O- methylglucosyl lipopolysaccharides (MGLP). Belongs to the methyltransferase superfamily. | 0.758 |
| ABK70363.1 | ABK72142.1 | MSMEG_4252 | MSMEG_1055 | Conserved hypothetical protein. | Identified by match to protein family HMM PF00132. | 0.766 |
| ABK70363.1 | ABK72474.1 | MSMEG_4252 | MSMEG_4249 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.806 |
| ABK70363.1 | ABK72817.1 | MSMEG_4252 | MSMEG_2335 | Conserved hypothetical protein. | Identified by match to protein family HMM PF00132. | 0.768 |
| ABK70363.1 | ABK73048.1 | MSMEG_4252 | MSMEG_1049 | Conserved hypothetical protein. | Methyltransferase, UbiE/COQ5 family protein. | 0.785 |
| ABK70363.1 | ABK73345.1 | MSMEG_4252 | MSMEG_4250 | Conserved hypothetical protein. | Putative membrane transport ATPase; Identified by match to protein family HMM PF02374. | 0.788 |
| ABK70363.1 | ABK74249.1 | MSMEG_4252 | MSMEG_1598 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.768 |
| ABK70363.1 | octT | MSMEG_4252 | MSMEG_4578 | Conserved hypothetical protein. | Conserved hypothetical protein; Sugar octanoyltransferase likely involved in the biosynthesis of mycobacterial methylglucose lipopolysaccharide (MGLP). Catalyzes the transfer of an octanoyl group from octanoyl-CoA to the C6 OH of the second glucose in diglucosylglycerate (DGG). DGG is the preferred acceptor, but to a lesser extent, GG (glucosylglycerate) can also be used as substrate. DGG and GG are the two earliest intermediates in MGLP biosynthesis; Belongs to the OctT acyltransferase family. | 0.783 |
| ABK71455.1 | ABK69952.1 | MSMEG_2349 | MSMEG_2329 | Glycosyl hydrolase, family protein 57; Identified by match to protein family HMM PF03065; Belongs to the glycosyl hydrolase 57 family. | Methyltransferase, UbiE/COQ5 family protein. | 0.710 |
| ABK71455.1 | ABK70363.1 | MSMEG_2349 | MSMEG_4252 | Glycosyl hydrolase, family protein 57; Identified by match to protein family HMM PF03065; Belongs to the glycosyl hydrolase 57 family. | Conserved hypothetical protein. | 0.763 |
| ABK71455.1 | ABK72111.1 | MSMEG_2349 | MSMEG_2350 | Glycosyl hydrolase, family protein 57; Identified by match to protein family HMM PF03065; Belongs to the glycosyl hydrolase 57 family. | Conserved hypothetical protein; Probable S-adenosylmethionine-dependent methyltransferase required for the 6-O-methylation of the polysaccharide backbone of 6-O- methylglucosyl lipopolysaccharides (MGLP). Belongs to the methyltransferase superfamily. | 0.982 |
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