STRINGSTRING
ABK76047.1 ABK76047.1 pimB pimB ABK71201.1 ABK71201.1 ABK72680.1 ABK72680.1 ABK70530.1 ABK70530.1 ABK73222.1 ABK73222.1 ABK72967.1 ABK72967.1 ABK76077.1 ABK76077.1 ABK72685.1 ABK72685.1 ABK72379.1 ABK72379.1 ABK72474.1 ABK72474.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK76047.1Conserved hypothetical protein. (265 aa)    
Predicted Functional Partners:
pimB
Glycosyl transferase, group 1 family protein; Involved in the biosynthesis of phosphatidyl-myo-inositol mannosides (PIM) which are early precursors in the biosynthesis of lipomannans (LM) and lipoarabinomannans (LAM). Catalyzes the addition of a mannosyl residue from GDP-D-mannose (GDP-Man) to the position 6 of a phosphatidyl-myo- inositol bearing an alpha-1,2-linked mannose residue (PIM1) to generate phosphatidyl-myo-inositol bearing alpha-1,2- and alpha-1,6-linked mannose residues (Ac1PIM2). PimB also catalyzes the addition of a mannosyl residue from GDP-Man to the position 6 of phos [...]
  
  
 0.834
ABK71201.1
Identified by match to protein family HMM PF00877.
  
  
 0.807
ABK72680.1
Conserved hypothetical protein.
  
 
 0.786
ABK70530.1
Conserved hypothetical protein.
  
 
 
 0.774
ABK73222.1
Conserved hypothetical protein.
  
 
 0.699
ABK72967.1
Conserved hypothetical protein.
  
 
 
 0.694
ABK76077.1
Conserved hypothetical protein.
  
 
 0.686
ABK72685.1
Conserved hypothetical protein.
  
 
 0.671
ABK72379.1
Putative conserved transmembrane protein.
  
    0.664
ABK72474.1
Conserved hypothetical protein.
 
    0.625
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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