Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ABK69679.1 | ABK74407.1 | MSMEG_4267 | MSMEG_4265 | Probable cytochrome c oxidase polypeptide 4; Part of cytochrome c oxidase, its function is unknown. Belongs to the cytochrome c oxidase bacterial subunit CtaF family. | MmpS3 protein. | 0.564 |
| ABK69679.1 | ABK74914.1 | MSMEG_4267 | MSMEG_4268 | Probable cytochrome c oxidase polypeptide 4; Part of cytochrome c oxidase, its function is unknown. Belongs to the cytochrome c oxidase bacterial subunit CtaF family. | Cytochrome c oxidase subunit 2; Identified by match to protein family HMM PF00116. | 0.999 |
| ABK71894.1 | ABK74407.1 | MSMEG_5660 | MSMEG_4265 | ABC transporter ATP-binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF00664. | MmpS3 protein. | 0.589 |
| ABK72278.1 | ABK74407.1 | MSMEG_4266 | MSMEG_4265 | Hypothetical protein; Identified by Glimmer2; putative. | MmpS3 protein. | 0.583 |
| ABK72278.1 | ABK74940.1 | MSMEG_4266 | MSMEG_4264 | Hypothetical protein; Identified by Glimmer2; putative. | Conserved hypothetical protein. | 0.579 |
| ABK74407.1 | ABK69679.1 | MSMEG_4265 | MSMEG_4267 | MmpS3 protein. | Probable cytochrome c oxidase polypeptide 4; Part of cytochrome c oxidase, its function is unknown. Belongs to the cytochrome c oxidase bacterial subunit CtaF family. | 0.564 |
| ABK74407.1 | ABK71894.1 | MSMEG_4265 | MSMEG_5660 | MmpS3 protein. | ABC transporter ATP-binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF00664. | 0.589 |
| ABK74407.1 | ABK72278.1 | MSMEG_4265 | MSMEG_4266 | MmpS3 protein. | Hypothetical protein; Identified by Glimmer2; putative. | 0.583 |
| ABK74407.1 | ABK74914.1 | MSMEG_4265 | MSMEG_4268 | MmpS3 protein. | Cytochrome c oxidase subunit 2; Identified by match to protein family HMM PF00116. | 0.562 |
| ABK74407.1 | ABK74940.1 | MSMEG_4265 | MSMEG_4264 | MmpS3 protein. | Conserved hypothetical protein. | 0.896 |
| ABK74407.1 | ponA1 | MSMEG_4265 | MSMEG_6900 | MmpS3 protein. | Penicillin-binding protein 1; Cell wall formation. Synthesis of cross-linked peptidoglycan from the lipid intermediates. The enzyme has a penicillin-insensitive transglycosylase N-terminal domain (formation of linear glycan strands) and a penicillin-sensitive transpeptidase C-terminal domain (cross- linking of the peptide subunits) (By similarity). | 0.528 |
| ABK74407.1 | wag31 | MSMEG_4265 | MSMEG_4217 | MmpS3 protein. | DivIVA protein; Important for maintaining cell shape and cell wall integrity by localizing peptidoglycan synthesis to the cell poles. Protects PbpB (PBP3, FtsI) from oxidative stress-induced cleavage. Belongs to the DivIVA family. | 0.426 |
| ABK74914.1 | ABK69679.1 | MSMEG_4268 | MSMEG_4267 | Cytochrome c oxidase subunit 2; Identified by match to protein family HMM PF00116. | Probable cytochrome c oxidase polypeptide 4; Part of cytochrome c oxidase, its function is unknown. Belongs to the cytochrome c oxidase bacterial subunit CtaF family. | 0.999 |
| ABK74914.1 | ABK74407.1 | MSMEG_4268 | MSMEG_4265 | Cytochrome c oxidase subunit 2; Identified by match to protein family HMM PF00116. | MmpS3 protein. | 0.562 |
| ABK74940.1 | ABK72278.1 | MSMEG_4264 | MSMEG_4266 | Conserved hypothetical protein. | Hypothetical protein; Identified by Glimmer2; putative. | 0.579 |
| ABK74940.1 | ABK74407.1 | MSMEG_4264 | MSMEG_4265 | Conserved hypothetical protein. | MmpS3 protein. | 0.896 |
| ponA1 | ABK74407.1 | MSMEG_6900 | MSMEG_4265 | Penicillin-binding protein 1; Cell wall formation. Synthesis of cross-linked peptidoglycan from the lipid intermediates. The enzyme has a penicillin-insensitive transglycosylase N-terminal domain (formation of linear glycan strands) and a penicillin-sensitive transpeptidase C-terminal domain (cross- linking of the peptide subunits) (By similarity). | MmpS3 protein. | 0.528 |
| ponA1 | wag31 | MSMEG_6900 | MSMEG_4217 | Penicillin-binding protein 1; Cell wall formation. Synthesis of cross-linked peptidoglycan from the lipid intermediates. The enzyme has a penicillin-insensitive transglycosylase N-terminal domain (formation of linear glycan strands) and a penicillin-sensitive transpeptidase C-terminal domain (cross- linking of the peptide subunits) (By similarity). | DivIVA protein; Important for maintaining cell shape and cell wall integrity by localizing peptidoglycan synthesis to the cell poles. Protects PbpB (PBP3, FtsI) from oxidative stress-induced cleavage. Belongs to the DivIVA family. | 0.941 |
| wag31 | ABK74407.1 | MSMEG_4217 | MSMEG_4265 | DivIVA protein; Important for maintaining cell shape and cell wall integrity by localizing peptidoglycan synthesis to the cell poles. Protects PbpB (PBP3, FtsI) from oxidative stress-induced cleavage. Belongs to the DivIVA family. | MmpS3 protein. | 0.426 |
| wag31 | ponA1 | MSMEG_4217 | MSMEG_6900 | DivIVA protein; Important for maintaining cell shape and cell wall integrity by localizing peptidoglycan synthesis to the cell poles. Protects PbpB (PBP3, FtsI) from oxidative stress-induced cleavage. Belongs to the DivIVA family. | Penicillin-binding protein 1; Cell wall formation. Synthesis of cross-linked peptidoglycan from the lipid intermediates. The enzyme has a penicillin-insensitive transglycosylase N-terminal domain (formation of linear glycan strands) and a penicillin-sensitive transpeptidase C-terminal domain (cross- linking of the peptide subunits) (By similarity). | 0.941 |