Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ABK70019.1 | ABK71314.1 | MSMEG_1578 | MSMEG_5611 | Peptidase M22, glycoprotease; Identified by match to protein family HMM PF00814. | Spore protein; Identified by match to protein family HMM PF00011; Belongs to the small heat shock protein (HSP20) family. | 0.628 |
| ABK70019.1 | ABK73065.1 | MSMEG_1578 | MSMEG_1051 | Peptidase M22, glycoprotease; Identified by match to protein family HMM PF00814. | Immunogenic protein MPB64/MPT64. | 0.793 |
| ABK70019.1 | ABK75360.1 | MSMEG_1578 | MSMEG_2331 | Peptidase M22, glycoprotease; Identified by match to protein family HMM PF00814. | Immunogenic protein MPB64/MPT64. | 0.796 |
| ABK70019.1 | ABK75863.1 | MSMEG_1578 | MSMEG_4320 | Peptidase M22, glycoprotease; Identified by match to protein family HMM PF00814. | Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Identified by match to protein family HMM PF00578. | 0.834 |
| ABK70019.1 | tsaD | MSMEG_1578 | MSMEG_1580 | Peptidase M22, glycoprotease; Identified by match to protein family HMM PF00814. | O-sialoglycoprotein endopeptidase; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family. | 0.999 |
| ABK71314.1 | ABK70019.1 | MSMEG_5611 | MSMEG_1578 | Spore protein; Identified by match to protein family HMM PF00011; Belongs to the small heat shock protein (HSP20) family. | Peptidase M22, glycoprotease; Identified by match to protein family HMM PF00814. | 0.628 |
| ABK71314.1 | ABK73065.1 | MSMEG_5611 | MSMEG_1051 | Spore protein; Identified by match to protein family HMM PF00011; Belongs to the small heat shock protein (HSP20) family. | Immunogenic protein MPB64/MPT64. | 0.656 |
| ABK71314.1 | ABK75360.1 | MSMEG_5611 | MSMEG_2331 | Spore protein; Identified by match to protein family HMM PF00011; Belongs to the small heat shock protein (HSP20) family. | Immunogenic protein MPB64/MPT64. | 0.656 |
| ABK71314.1 | ABK75863.1 | MSMEG_5611 | MSMEG_4320 | Spore protein; Identified by match to protein family HMM PF00011; Belongs to the small heat shock protein (HSP20) family. | Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Identified by match to protein family HMM PF00578. | 0.644 |
| ABK71314.1 | tsaD | MSMEG_5611 | MSMEG_1580 | Spore protein; Identified by match to protein family HMM PF00011; Belongs to the small heat shock protein (HSP20) family. | O-sialoglycoprotein endopeptidase; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family. | 0.538 |
| ABK73065.1 | ABK70019.1 | MSMEG_1051 | MSMEG_1578 | Immunogenic protein MPB64/MPT64. | Peptidase M22, glycoprotease; Identified by match to protein family HMM PF00814. | 0.793 |
| ABK73065.1 | ABK71314.1 | MSMEG_1051 | MSMEG_5611 | Immunogenic protein MPB64/MPT64. | Spore protein; Identified by match to protein family HMM PF00011; Belongs to the small heat shock protein (HSP20) family. | 0.656 |
| ABK73065.1 | ABK75863.1 | MSMEG_1051 | MSMEG_4320 | Immunogenic protein MPB64/MPT64. | Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Identified by match to protein family HMM PF00578. | 0.763 |
| ABK73065.1 | tsaD | MSMEG_1051 | MSMEG_1580 | Immunogenic protein MPB64/MPT64. | O-sialoglycoprotein endopeptidase; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family. | 0.661 |
| ABK73454.1 | ABK73669.1 | MSMEG_3216 | MSMEG_4891 | Peroxiredoxin Q; Identified by match to protein family HMM PF00578. | Alkylhydroperoxide reductase; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides. Together with AhpD, DlaT and Lpd, constitutes an NADH-dependent peroxidase active against hydrogen and alkyl peroxides as well as serving as a peroxynitrite reductase, thus protecting the bacterium against reactive nitrogen intermediates and oxidative stress generated by the host immune system. Does not however seem to play a role in det [...] | 0.462 |
| ABK73454.1 | ABK75863.1 | MSMEG_3216 | MSMEG_4320 | Peroxiredoxin Q; Identified by match to protein family HMM PF00578. | Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Identified by match to protein family HMM PF00578. | 0.702 |
| ABK73454.1 | trxB | MSMEG_3216 | MSMEG_6933 | Peroxiredoxin Q; Identified by match to protein family HMM PF00578. | Thioredoxin-disulfide reductase; Identified by match to protein family HMM PF00070; match to protein family HMM PF07992; match to protein family HMM TIGR01292. | 0.415 |
| ABK73669.1 | ABK73454.1 | MSMEG_4891 | MSMEG_3216 | Alkylhydroperoxide reductase; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides. Together with AhpD, DlaT and Lpd, constitutes an NADH-dependent peroxidase active against hydrogen and alkyl peroxides as well as serving as a peroxynitrite reductase, thus protecting the bacterium against reactive nitrogen intermediates and oxidative stress generated by the host immune system. Does not however seem to play a role in det [...] | Peroxiredoxin Q; Identified by match to protein family HMM PF00578. | 0.462 |
| ABK73669.1 | ABK75863.1 | MSMEG_4891 | MSMEG_4320 | Alkylhydroperoxide reductase; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides. Together with AhpD, DlaT and Lpd, constitutes an NADH-dependent peroxidase active against hydrogen and alkyl peroxides as well as serving as a peroxynitrite reductase, thus protecting the bacterium against reactive nitrogen intermediates and oxidative stress generated by the host immune system. Does not however seem to play a role in det [...] | Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Identified by match to protein family HMM PF00578. | 0.786 |
| ABK73669.1 | trxB | MSMEG_4891 | MSMEG_6933 | Alkylhydroperoxide reductase; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides. Together with AhpD, DlaT and Lpd, constitutes an NADH-dependent peroxidase active against hydrogen and alkyl peroxides as well as serving as a peroxynitrite reductase, thus protecting the bacterium against reactive nitrogen intermediates and oxidative stress generated by the host immune system. Does not however seem to play a role in det [...] | Thioredoxin-disulfide reductase; Identified by match to protein family HMM PF00070; match to protein family HMM PF07992; match to protein family HMM TIGR01292. | 0.889 |
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