Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ABK70145.1 | ABK71032.1 | MSMEG_4338 | MSMEG_4342 | Possible transcriptional regulatory protein. | Identified by match to protein family HMM PF00753. | 0.707 |
| ABK70145.1 | ABK71694.1 | MSMEG_4338 | MSMEG_4337 | Possible transcriptional regulatory protein. | Beta-lactamase; Identified by match to protein family HMM PF00144. | 0.807 |
| ABK70145.1 | ABK73768.1 | MSMEG_4338 | MSMEG_4339 | Possible transcriptional regulatory protein. | Identified by match to protein family HMM PF00196; match to protein family HMM PF07719. | 0.656 |
| ABK70145.1 | ABK73832.1 | MSMEG_4338 | MSMEG_4336 | Possible transcriptional regulatory protein. | Conserved hypothetical protein. | 0.469 |
| ABK71032.1 | ABK70145.1 | MSMEG_4342 | MSMEG_4338 | Identified by match to protein family HMM PF00753. | Possible transcriptional regulatory protein. | 0.707 |
| ABK71032.1 | ABK71694.1 | MSMEG_4342 | MSMEG_4337 | Identified by match to protein family HMM PF00753. | Beta-lactamase; Identified by match to protein family HMM PF00144. | 0.686 |
| ABK71032.1 | ABK73768.1 | MSMEG_4342 | MSMEG_4339 | Identified by match to protein family HMM PF00753. | Identified by match to protein family HMM PF00196; match to protein family HMM PF07719. | 0.525 |
| ABK71032.1 | ABK73832.1 | MSMEG_4342 | MSMEG_4336 | Identified by match to protein family HMM PF00753. | Conserved hypothetical protein. | 0.411 |
| ABK71694.1 | ABK70145.1 | MSMEG_4337 | MSMEG_4338 | Beta-lactamase; Identified by match to protein family HMM PF00144. | Possible transcriptional regulatory protein. | 0.807 |
| ABK71694.1 | ABK71032.1 | MSMEG_4337 | MSMEG_4342 | Beta-lactamase; Identified by match to protein family HMM PF00144. | Identified by match to protein family HMM PF00753. | 0.686 |
| ABK71694.1 | ABK73539.1 | MSMEG_4337 | MSMEG_5693 | Beta-lactamase; Identified by match to protein family HMM PF00144. | Transporter, major facilitator family protein; Identified by match to protein family HMM PF07690. | 0.428 |
| ABK71694.1 | ABK73703.1 | MSMEG_4337 | MSMEG_6336 | Beta-lactamase; Identified by match to protein family HMM PF00144. | Conserved hypothetical protein. | 0.421 |
| ABK71694.1 | ABK73768.1 | MSMEG_4337 | MSMEG_4339 | Beta-lactamase; Identified by match to protein family HMM PF00144. | Identified by match to protein family HMM PF00196; match to protein family HMM PF07719. | 0.427 |
| ABK71694.1 | ABK73832.1 | MSMEG_4337 | MSMEG_4336 | Beta-lactamase; Identified by match to protein family HMM PF00144. | Conserved hypothetical protein. | 0.630 |
| ABK71694.1 | ABK75969.1 | MSMEG_4337 | MSMEG_2932 | Beta-lactamase; Identified by match to protein family HMM PF00144. | Identified by match to protein family HMM PF01230. | 0.461 |
| ABK71694.1 | lgt | MSMEG_4337 | MSMEG_5408 | Beta-lactamase; Identified by match to protein family HMM PF00144. | Prolipoprotein diacylglyceryl transferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins. | 0.613 |
| ABK71694.1 | lgt-2 | MSMEG_4337 | MSMEG_3222 | Beta-lactamase; Identified by match to protein family HMM PF00144. | Prolipoprotein diacylglyceryl transferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins; Belongs to the Lgt family. | 0.621 |
| ABK71694.1 | whiB3 | MSMEG_4337 | MSMEG_1597 | Beta-lactamase; Identified by match to protein family HMM PF00144. | Transcription factor WhiB; A redox-sensitive transcriptional regulator. Maintains intracellular redox homeostasis by regulating catabolic metabolism and polyketide biosynthesis. Regulates expression of the redox buffer ergothioneine (ERG). In concert with myothiol (MSH), another redox buffer, responds to low pH leading to acid resistance. The apo- but not holo-form probably binds DNA (By similarity). | 0.518 |
| ABK73539.1 | ABK71694.1 | MSMEG_5693 | MSMEG_4337 | Transporter, major facilitator family protein; Identified by match to protein family HMM PF07690. | Beta-lactamase; Identified by match to protein family HMM PF00144. | 0.428 |
| ABK73703.1 | ABK71694.1 | MSMEG_6336 | MSMEG_4337 | Conserved hypothetical protein. | Beta-lactamase; Identified by match to protein family HMM PF00144. | 0.421 |
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