Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ABK69696.1 | ABK71032.1 | MSMEG_5386 | MSMEG_4342 | Rhodanese-like domain protein; Identified by match to protein family HMM PF00581. | Identified by match to protein family HMM PF00753. | 0.443 |
| ABK69696.1 | ABK76104.1 | MSMEG_5386 | MSMEG_6425 | Rhodanese-like domain protein; Identified by match to protein family HMM PF00581. | Rhodanese-like domain protein; Identified by match to protein family HMM PF00581. | 0.676 |
| ABK69696.1 | ybeY | MSMEG_5386 | MSMEG_4496 | Rhodanese-like domain protein; Identified by match to protein family HMM PF00581. | Conserved hypothetical protein; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. | 0.669 |
| ABK70145.1 | ABK71032.1 | MSMEG_4338 | MSMEG_4342 | Possible transcriptional regulatory protein. | Identified by match to protein family HMM PF00753. | 0.707 |
| ABK70145.1 | ABK71694.1 | MSMEG_4338 | MSMEG_4337 | Possible transcriptional regulatory protein. | Beta-lactamase; Identified by match to protein family HMM PF00144. | 0.807 |
| ABK70145.1 | ABK73768.1 | MSMEG_4338 | MSMEG_4339 | Possible transcriptional regulatory protein. | Identified by match to protein family HMM PF00196; match to protein family HMM PF07719. | 0.656 |
| ABK70145.1 | ABK74715.1 | MSMEG_4338 | MSMEG_4340 | Possible transcriptional regulatory protein. | NAD/mycothiol-dependent formaldehyde dehydrogenase; Identified by match to protein family HMM PF00107. | 0.720 |
| ABK71032.1 | ABK69696.1 | MSMEG_4342 | MSMEG_5386 | Identified by match to protein family HMM PF00753. | Rhodanese-like domain protein; Identified by match to protein family HMM PF00581. | 0.443 |
| ABK71032.1 | ABK70145.1 | MSMEG_4342 | MSMEG_4338 | Identified by match to protein family HMM PF00753. | Possible transcriptional regulatory protein. | 0.707 |
| ABK71032.1 | ABK71694.1 | MSMEG_4342 | MSMEG_4337 | Identified by match to protein family HMM PF00753. | Beta-lactamase; Identified by match to protein family HMM PF00144. | 0.686 |
| ABK71032.1 | ABK72761.1 | MSMEG_4342 | MSMEG_1979 | Identified by match to protein family HMM PF00753. | Antibiotic biosynthesis monooxygenase; Identified by match to protein family HMM PF03992. | 0.419 |
| ABK71032.1 | ABK73768.1 | MSMEG_4342 | MSMEG_4339 | Identified by match to protein family HMM PF00753. | Identified by match to protein family HMM PF00196; match to protein family HMM PF07719. | 0.525 |
| ABK71032.1 | ABK74715.1 | MSMEG_4342 | MSMEG_4340 | Identified by match to protein family HMM PF00753. | NAD/mycothiol-dependent formaldehyde dehydrogenase; Identified by match to protein family HMM PF00107. | 0.941 |
| ABK71032.1 | ABK74818.1 | MSMEG_4342 | MSMEG_0754 | Identified by match to protein family HMM PF00753. | Conserved hypothetical protein. | 0.475 |
| ABK71032.1 | ABK75967.1 | MSMEG_4342 | MSMEG_6190 | Identified by match to protein family HMM PF00753. | Identified by match to protein family HMM PF00753. | 0.472 |
| ABK71032.1 | ABK76104.1 | MSMEG_4342 | MSMEG_6425 | Identified by match to protein family HMM PF00753. | Rhodanese-like domain protein; Identified by match to protein family HMM PF00581. | 0.498 |
| ABK71032.1 | ybeY | MSMEG_4342 | MSMEG_4496 | Identified by match to protein family HMM PF00753. | Conserved hypothetical protein; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. | 0.418 |
| ABK71694.1 | ABK70145.1 | MSMEG_4337 | MSMEG_4338 | Beta-lactamase; Identified by match to protein family HMM PF00144. | Possible transcriptional regulatory protein. | 0.807 |
| ABK71694.1 | ABK71032.1 | MSMEG_4337 | MSMEG_4342 | Beta-lactamase; Identified by match to protein family HMM PF00144. | Identified by match to protein family HMM PF00753. | 0.686 |
| ABK71694.1 | ABK73768.1 | MSMEG_4337 | MSMEG_4339 | Beta-lactamase; Identified by match to protein family HMM PF00144. | Identified by match to protein family HMM PF00196; match to protein family HMM PF07719. | 0.427 |
page 1 of 2