Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABK70721.1 | ABK71731.1 | MSMEG_3943 | MSMEG_5245 | Conserved hypothetical protein. | Identified by match to protein family HMM PF00582. | 0.498 |
ABK70721.1 | ABK72585.1 | MSMEG_3943 | MSMEG_4361 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.471 |
ABK71602.1 | ABK71731.1 | MSMEG_3952 | MSMEG_5245 | Conserved hypothetical protein. | Identified by match to protein family HMM PF00582. | 0.491 |
ABK71602.1 | ABK72585.1 | MSMEG_3952 | MSMEG_4361 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.408 |
ABK71731.1 | ABK70721.1 | MSMEG_5245 | MSMEG_3943 | Identified by match to protein family HMM PF00582. | Conserved hypothetical protein. | 0.498 |
ABK71731.1 | ABK71602.1 | MSMEG_5245 | MSMEG_3952 | Identified by match to protein family HMM PF00582. | Conserved hypothetical protein. | 0.491 |
ABK71731.1 | ABK72096.1 | MSMEG_5245 | MSMEG_3939 | Identified by match to protein family HMM PF00582. | Identified by match to protein family HMM PF00582. | 0.426 |
ABK71731.1 | ABK72585.1 | MSMEG_5245 | MSMEG_4361 | Identified by match to protein family HMM PF00582. | Conserved hypothetical protein. | 0.492 |
ABK71731.1 | ABK73366.1 | MSMEG_5245 | MSMEG_3955 | Identified by match to protein family HMM PF00582. | Conserved hypothetical protein. | 0.439 |
ABK72096.1 | ABK71731.1 | MSMEG_3939 | MSMEG_5245 | Identified by match to protein family HMM PF00582. | Identified by match to protein family HMM PF00582. | 0.426 |
ABK72096.1 | ABK72585.1 | MSMEG_3939 | MSMEG_4361 | Identified by match to protein family HMM PF00582. | Conserved hypothetical protein. | 0.473 |
ABK72294.1 | ABK72585.1 | MSMEG_4359 | MSMEG_4361 | Hypothetical protein; Identified by Glimmer2; putative. | Conserved hypothetical protein. | 0.572 |
ABK72510.1 | ABK72585.1 | MSMEG_1637 | MSMEG_4361 | Periplasmic sensor signal transduction histidine kinase; Identified by match to protein family HMM PF00672; match to protein family HMM PF02518. | Conserved hypothetical protein. | 0.413 |
ABK72585.1 | ABK70721.1 | MSMEG_4361 | MSMEG_3943 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.471 |
ABK72585.1 | ABK71602.1 | MSMEG_4361 | MSMEG_3952 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.408 |
ABK72585.1 | ABK71731.1 | MSMEG_4361 | MSMEG_5245 | Conserved hypothetical protein. | Identified by match to protein family HMM PF00582. | 0.492 |
ABK72585.1 | ABK72096.1 | MSMEG_4361 | MSMEG_3939 | Conserved hypothetical protein. | Identified by match to protein family HMM PF00582. | 0.473 |
ABK72585.1 | ABK72294.1 | MSMEG_4361 | MSMEG_4359 | Conserved hypothetical protein. | Hypothetical protein; Identified by Glimmer2; putative. | 0.572 |
ABK72585.1 | ABK72510.1 | MSMEG_4361 | MSMEG_1637 | Conserved hypothetical protein. | Periplasmic sensor signal transduction histidine kinase; Identified by match to protein family HMM PF00672; match to protein family HMM PF02518. | 0.413 |
ABK72585.1 | ABK73325.1 | MSMEG_4361 | MSMEG_1127 | Conserved hypothetical protein. | Probable conserved transmembrane protein. | 0.473 |
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