STRINGSTRING
ABK72585.1 ABK72585.1 ABK72294.1 ABK72294.1 ABK71731.1 ABK71731.1 ABK73325.1 ABK73325.1 ABK72096.1 ABK72096.1 ABK70721.1 ABK70721.1 ABK73366.1 ABK73366.1 ABK72510.1 ABK72510.1 ABK74663.1 ABK74663.1 ABK71602.1 ABK71602.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK72585.1Conserved hypothetical protein. (80 aa)    
Predicted Functional Partners:
ABK72294.1
Hypothetical protein; Identified by Glimmer2; putative.
       0.572
ABK71731.1
Identified by match to protein family HMM PF00582.
 
  
 0.492
ABK73325.1
Probable conserved transmembrane protein.
  
    0.473
ABK72096.1
Identified by match to protein family HMM PF00582.
 
  
 0.473
ABK70721.1
Conserved hypothetical protein.
 
    0.471
ABK73366.1
Conserved hypothetical protein.
 
    0.434
ABK72510.1
Periplasmic sensor signal transduction histidine kinase; Identified by match to protein family HMM PF00672; match to protein family HMM PF02518.
 
    0.413
ABK74663.1
Probable conserved transmembrane protein.
  
    0.412
ABK71602.1
Conserved hypothetical protein.
 
    0.408
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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