Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ABK70370.1 | ABK72172.1 | MSMEG_5458 | MSMEG_4207 | Cyclic nucleotide-binding protein; Catalyzes specifically the acetylation of the epsilon-amino group of a highly conserved lysine residue in acetyl-CoA synthetase (ACS) and of the universal stress protein (USP) MSMEG_4207. Acetylation results in the inactivation of ACS activity and could be important for mycobacteria to adjust to environmental changes. | Identified by match to protein family HMM PF00582. | 0.468 |
| ABK70370.1 | ABK73898.1 | MSMEG_5458 | MSMEG_4362 | Cyclic nucleotide-binding protein; Catalyzes specifically the acetylation of the epsilon-amino group of a highly conserved lysine residue in acetyl-CoA synthetase (ACS) and of the universal stress protein (USP) MSMEG_4207. Acetylation results in the inactivation of ACS activity and could be important for mycobacteria to adjust to environmental changes. | Identified by match to protein family HMM PF00582. | 0.655 |
| ABK70370.1 | ABK76032.1 | MSMEG_5458 | MSMEG_1195 | Cyclic nucleotide-binding protein; Catalyzes specifically the acetylation of the epsilon-amino group of a highly conserved lysine residue in acetyl-CoA synthetase (ACS) and of the universal stress protein (USP) MSMEG_4207. Acetylation results in the inactivation of ACS activity and could be important for mycobacteria to adjust to environmental changes. | Conserved hypothetical protein. | 0.425 |
| ABK70441.1 | ABK73376.1 | MSMEG_1396 | MSMEG_0090 | LprB protein. | Conserved hypothetical protein. | 0.537 |
| ABK70441.1 | ABK73898.1 | MSMEG_1396 | MSMEG_4362 | LprB protein. | Identified by match to protein family HMM PF00582. | 0.606 |
| ABK70441.1 | ABK75418.1 | MSMEG_1396 | MSMEG_4647 | LprB protein. | Carbohydrate kinase, PfkB, putative; Identified by match to protein family HMM PF00294. | 0.711 |
| ABK70441.1 | ABK75522.1 | MSMEG_1396 | MSMEG_3570 | LprB protein. | Conserved hypothetical protein; Identified by match to protein family HMM PF05976. | 0.746 |
| ABK70441.1 | ABK75772.1 | MSMEG_1396 | MSMEG_5151 | LprB protein. | Conserved hypothetical protein. | 0.709 |
| ABK70441.1 | ABK76032.1 | MSMEG_1396 | MSMEG_1195 | LprB protein. | Conserved hypothetical protein. | 0.689 |
| ABK71831.1 | ABK73898.1 | MSMEG_4360 | MSMEG_4362 | Conserved hypothetical protein. | Identified by match to protein family HMM PF00582. | 0.618 |
| ABK71831.1 | ABK76032.1 | MSMEG_4360 | MSMEG_1195 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.418 |
| ABK72172.1 | ABK70370.1 | MSMEG_4207 | MSMEG_5458 | Identified by match to protein family HMM PF00582. | Cyclic nucleotide-binding protein; Catalyzes specifically the acetylation of the epsilon-amino group of a highly conserved lysine residue in acetyl-CoA synthetase (ACS) and of the universal stress protein (USP) MSMEG_4207. Acetylation results in the inactivation of ACS activity and could be important for mycobacteria to adjust to environmental changes. | 0.468 |
| ABK72172.1 | ABK73898.1 | MSMEG_4207 | MSMEG_4362 | Identified by match to protein family HMM PF00582. | Identified by match to protein family HMM PF00582. | 0.811 |
| ABK73376.1 | ABK70441.1 | MSMEG_0090 | MSMEG_1396 | Conserved hypothetical protein. | LprB protein. | 0.537 |
| ABK73376.1 | ABK73630.1 | MSMEG_0090 | MSMEG_0449 | Conserved hypothetical protein. | Transporter, major facilitator family protein, putative; Identified by match to protein family HMM PF00582; match to protein family HMM PF07690. | 0.687 |
| ABK73376.1 | ABK73898.1 | MSMEG_0090 | MSMEG_4362 | Conserved hypothetical protein. | Identified by match to protein family HMM PF00582. | 0.673 |
| ABK73376.1 | ABK75418.1 | MSMEG_0090 | MSMEG_4647 | Conserved hypothetical protein. | Carbohydrate kinase, PfkB, putative; Identified by match to protein family HMM PF00294. | 0.708 |
| ABK73376.1 | ABK75522.1 | MSMEG_0090 | MSMEG_3570 | Conserved hypothetical protein. | Conserved hypothetical protein; Identified by match to protein family HMM PF05976. | 0.770 |
| ABK73376.1 | ABK75772.1 | MSMEG_0090 | MSMEG_5151 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.677 |
| ABK73376.1 | ABK76032.1 | MSMEG_0090 | MSMEG_1195 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.707 |
page 1 of 4