STRINGSTRING
ABK70958.1 ABK70958.1 ABK70045.1 ABK70045.1 ABK74508.1 ABK74508.1 ABK70654.1 ABK70654.1 ABK73843.1 ABK73843.1 speB-3 speB-3 ABK72878.1 ABK72878.1 ABK75076.1 ABK75076.1 ABK72964.1 ABK72964.1 ABK75700.1 ABK75700.1 ABK72935.1 ABK72935.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK70958.1Putative regulatory protein, FmdB family protein; Identified by match to protein family HMM TIGR02605. (95 aa)    
Predicted Functional Partners:
ABK70045.1
Formamidase; Identified by match to protein family HMM PF03069.
 
  
 0.755
ABK74508.1
Formamidase; Identified by match to protein family HMM PF03069.
 
  
 0.693
ABK70654.1
Amidate substrates transporter protein; Identified by match to protein family HMM PF02293.
 
    0.614
ABK73843.1
Formamidase; Identified by match to protein family HMM PF03069.
 
  
 0.591
speB-3
Agmatinase; Identified by match to protein family HMM PF00491; match to protein family HMM TIGR01230; Belongs to the arginase family.
  
    0.483
ABK72878.1
Identified by match to protein family HMM PF07905.
       0.480
ABK75076.1
Amidase; Identified by match to protein family HMM PF03069.
 
  
 0.435
ABK72964.1
Nitrile hydratase regulator1.
 
     0.409
ABK75700.1
Polysaccharide deacetylase, putative; Identified by match to protein family HMM PF01522.
  
    0.403
ABK72935.1
Vanillate O-demethylase oxidoreductase; Identified by match to protein family HMM PF00111; match to protein family HMM PF00175; match to protein family HMM PF00970.
  
    0.402
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
Server load: low (12%) [HD]