STRINGSTRING
ABK70054.1 ABK70054.1 ABK74670.1 ABK74670.1 ABK74213.1 ABK74213.1 ABK73816.1 ABK73816.1 ABK71606.1 ABK71606.1 ABK76134.1 ABK76134.1 ABK74796.1 ABK74796.1 ABK74121.1 ABK74121.1 ABK74515.1 ABK74515.1 ABK69784.1 ABK69784.1 ABK71928.1 ABK71928.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK70054.1Putative oxidoreductase. (133 aa)    
Predicted Functional Partners:
ABK74670.1
Endoribonuclease L-PSP; Identified by match to protein family HMM PF01042.
  
    0.799
ABK74213.1
Transmembrane efflux pump; Identified by match to protein family HMM PF07690.
  
  
 0.784
ABK73816.1
Oxidoreductase; Identified by match to protein family HMM PF00070; match to protein family HMM PF01134; match to protein family HMM PF01266; match to protein family HMM PF02852; match to protein family HMM PF07992.
  
  
 0.650
ABK71606.1
Conserved hypothetical protein.
  
    0.644
ABK76134.1
Oxidoreductase.
  
    0.634
ABK74796.1
Cupin 2, conserved barrel; Identified by match to protein family HMM PF07883.
  
    0.613
ABK74121.1
Conserved hypothetical protein.
 
  
 0.608
ABK74515.1
Conserved hypothetical protein.
 
  
 0.599
ABK69784.1
Conserved hypothetical protein.
 
  
 0.566
ABK71928.1
Conserved hypothetical protein; Identified by match to protein family HMM PF00903.
 
  
 0.544
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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