Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABK69784.1 | ABK70054.1 | MSMEG_1513 | MSMEG_4425 | Conserved hypothetical protein. | Putative oxidoreductase. | 0.566 |
ABK69784.1 | ABK74515.1 | MSMEG_1513 | MSMEG_1514 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.713 |
ABK70054.1 | ABK69784.1 | MSMEG_4425 | MSMEG_1513 | Putative oxidoreductase. | Conserved hypothetical protein. | 0.566 |
ABK70054.1 | ABK71606.1 | MSMEG_4425 | MSMEG_4421 | Putative oxidoreductase. | Conserved hypothetical protein. | 0.644 |
ABK70054.1 | ABK71928.1 | MSMEG_4425 | MSMEG_1067 | Putative oxidoreductase. | Conserved hypothetical protein; Identified by match to protein family HMM PF00903. | 0.544 |
ABK70054.1 | ABK73816.1 | MSMEG_4425 | MSMEG_4422 | Putative oxidoreductase. | Oxidoreductase; Identified by match to protein family HMM PF00070; match to protein family HMM PF01134; match to protein family HMM PF01266; match to protein family HMM PF02852; match to protein family HMM PF07992. | 0.650 |
ABK70054.1 | ABK74121.1 | MSMEG_4425 | MSMEG_4141 | Putative oxidoreductase. | Conserved hypothetical protein. | 0.608 |
ABK70054.1 | ABK74213.1 | MSMEG_4425 | MSMEG_4427 | Putative oxidoreductase. | Transmembrane efflux pump; Identified by match to protein family HMM PF07690. | 0.784 |
ABK70054.1 | ABK74515.1 | MSMEG_4425 | MSMEG_1514 | Putative oxidoreductase. | Conserved hypothetical protein. | 0.599 |
ABK70054.1 | ABK74670.1 | MSMEG_4425 | MSMEG_4424 | Putative oxidoreductase. | Endoribonuclease L-PSP; Identified by match to protein family HMM PF01042. | 0.799 |
ABK70054.1 | ABK74796.1 | MSMEG_4425 | MSMEG_4420 | Putative oxidoreductase. | Cupin 2, conserved barrel; Identified by match to protein family HMM PF07883. | 0.613 |
ABK70054.1 | ABK76134.1 | MSMEG_4425 | MSMEG_4423 | Putative oxidoreductase. | Oxidoreductase. | 0.634 |
ABK71606.1 | ABK70054.1 | MSMEG_4421 | MSMEG_4425 | Conserved hypothetical protein. | Putative oxidoreductase. | 0.644 |
ABK71606.1 | ABK73816.1 | MSMEG_4421 | MSMEG_4422 | Conserved hypothetical protein. | Oxidoreductase; Identified by match to protein family HMM PF00070; match to protein family HMM PF01134; match to protein family HMM PF01266; match to protein family HMM PF02852; match to protein family HMM PF07992. | 0.785 |
ABK71606.1 | ABK74213.1 | MSMEG_4421 | MSMEG_4427 | Conserved hypothetical protein. | Transmembrane efflux pump; Identified by match to protein family HMM PF07690. | 0.687 |
ABK71606.1 | ABK74670.1 | MSMEG_4421 | MSMEG_4424 | Conserved hypothetical protein. | Endoribonuclease L-PSP; Identified by match to protein family HMM PF01042. | 0.635 |
ABK71606.1 | ABK74796.1 | MSMEG_4421 | MSMEG_4420 | Conserved hypothetical protein. | Cupin 2, conserved barrel; Identified by match to protein family HMM PF07883. | 0.850 |
ABK71606.1 | ABK76134.1 | MSMEG_4421 | MSMEG_4423 | Conserved hypothetical protein. | Oxidoreductase. | 0.819 |
ABK71928.1 | ABK70054.1 | MSMEG_1067 | MSMEG_4425 | Conserved hypothetical protein; Identified by match to protein family HMM PF00903. | Putative oxidoreductase. | 0.544 |
ABK73816.1 | ABK70054.1 | MSMEG_4422 | MSMEG_4425 | Oxidoreductase; Identified by match to protein family HMM PF00070; match to protein family HMM PF01134; match to protein family HMM PF01266; match to protein family HMM PF02852; match to protein family HMM PF07992. | Putative oxidoreductase. | 0.650 |
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