Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABK71070.1 | ABK73468.1 | MSMEG_4434 | MSMEG_4431 | Cof protein; Identified by match to protein family HMM PF00702; match to protein family HMM PF05116; match to protein family HMM TIGR00099; match to protein family HMM TIGR01484. | Putative regulatory protein; Identified by match to protein family HMM PF00196. | 0.563 |
ABK71070.1 | ABK73606.1 | MSMEG_4434 | MSMEG_4432 | Cof protein; Identified by match to protein family HMM PF00702; match to protein family HMM PF05116; match to protein family HMM TIGR00099; match to protein family HMM TIGR01484. | Hypothetical protein; Identified by Glimmer2; putative. | 0.566 |
ABK71070.1 | ABK75372.1 | MSMEG_4434 | MSMEG_4433 | Cof protein; Identified by match to protein family HMM PF00702; match to protein family HMM PF05116; match to protein family HMM TIGR00099; match to protein family HMM TIGR01484. | Dehydrogenase; Identified by match to protein family HMM PF00070; match to protein family HMM PF07992. | 0.788 |
ABK73468.1 | ABK71070.1 | MSMEG_4431 | MSMEG_4434 | Putative regulatory protein; Identified by match to protein family HMM PF00196. | Cof protein; Identified by match to protein family HMM PF00702; match to protein family HMM PF05116; match to protein family HMM TIGR00099; match to protein family HMM TIGR01484. | 0.563 |
ABK73468.1 | ABK73606.1 | MSMEG_4431 | MSMEG_4432 | Putative regulatory protein; Identified by match to protein family HMM PF00196. | Hypothetical protein; Identified by Glimmer2; putative. | 0.761 |
ABK73468.1 | ABK75372.1 | MSMEG_4431 | MSMEG_4433 | Putative regulatory protein; Identified by match to protein family HMM PF00196. | Dehydrogenase; Identified by match to protein family HMM PF00070; match to protein family HMM PF07992. | 0.616 |
ABK73606.1 | ABK71070.1 | MSMEG_4432 | MSMEG_4434 | Hypothetical protein; Identified by Glimmer2; putative. | Cof protein; Identified by match to protein family HMM PF00702; match to protein family HMM PF05116; match to protein family HMM TIGR00099; match to protein family HMM TIGR01484. | 0.566 |
ABK73606.1 | ABK73468.1 | MSMEG_4432 | MSMEG_4431 | Hypothetical protein; Identified by Glimmer2; putative. | Putative regulatory protein; Identified by match to protein family HMM PF00196. | 0.761 |
ABK73606.1 | ABK75372.1 | MSMEG_4432 | MSMEG_4433 | Hypothetical protein; Identified by Glimmer2; putative. | Dehydrogenase; Identified by match to protein family HMM PF00070; match to protein family HMM PF07992. | 0.566 |
ABK75372.1 | ABK71070.1 | MSMEG_4433 | MSMEG_4434 | Dehydrogenase; Identified by match to protein family HMM PF00070; match to protein family HMM PF07992. | Cof protein; Identified by match to protein family HMM PF00702; match to protein family HMM PF05116; match to protein family HMM TIGR00099; match to protein family HMM TIGR01484. | 0.788 |
ABK75372.1 | ABK73468.1 | MSMEG_4433 | MSMEG_4431 | Dehydrogenase; Identified by match to protein family HMM PF00070; match to protein family HMM PF07992. | Putative regulatory protein; Identified by match to protein family HMM PF00196. | 0.616 |
ABK75372.1 | ABK73606.1 | MSMEG_4433 | MSMEG_4432 | Dehydrogenase; Identified by match to protein family HMM PF00070; match to protein family HMM PF07992. | Hypothetical protein; Identified by Glimmer2; putative. | 0.566 |