Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ABK70782.1 | ABK75372.1 | MSMEG_6530 | MSMEG_4433 | Cytochrome c oxidase subunit III family protein; Identified by match to protein family HMM PF00510. | Dehydrogenase; Identified by match to protein family HMM PF00070; match to protein family HMM PF07992. | 0.434 |
| ABK70782.1 | ABK75942.1 | MSMEG_6530 | MSMEG_4262 | Cytochrome c oxidase subunit III family protein; Identified by match to protein family HMM PF00510. | Ubiquinol-cytochrome c reductase iron-sulfur subunit; Identified by match to protein family HMM PF00355. | 0.994 |
| ABK70782.1 | sucA | MSMEG_6530 | MSMEG_5049 | Cytochrome c oxidase subunit III family protein; Identified by match to protein family HMM PF00510. | 2-oxoglutarate dehydrogenase, E1 component; Shows three enzymatic activities that share a first common step, the attack of thiamine-PP on 2-oxoglutarate (alpha-ketoglutarate, KG), leading to the formation of an enamine-thiamine-PP intermediate upon decarboxylation. Thus, displays KGD activity, catalyzing the decarboxylation from five-carbon 2-oxoglutarate to four-carbon succinate semialdehyde (SSA). Also catalyzes C-C bond formation between the activated aldehyde formed after decarboxylation of alpha- ketoglutarate and the carbonyl of glyoxylate (GLX), to yield 2-hydroxy- 3-oxoadipate [...] | 0.683 |
| ABK71070.1 | ABK73468.1 | MSMEG_4434 | MSMEG_4431 | Cof protein; Identified by match to protein family HMM PF00702; match to protein family HMM PF05116; match to protein family HMM TIGR00099; match to protein family HMM TIGR01484. | Putative regulatory protein; Identified by match to protein family HMM PF00196. | 0.563 |
| ABK71070.1 | ABK73606.1 | MSMEG_4434 | MSMEG_4432 | Cof protein; Identified by match to protein family HMM PF00702; match to protein family HMM PF05116; match to protein family HMM TIGR00099; match to protein family HMM TIGR01484. | Hypothetical protein; Identified by Glimmer2; putative. | 0.566 |
| ABK71070.1 | ABK75372.1 | MSMEG_4434 | MSMEG_4433 | Cof protein; Identified by match to protein family HMM PF00702; match to protein family HMM PF05116; match to protein family HMM TIGR00099; match to protein family HMM TIGR01484. | Dehydrogenase; Identified by match to protein family HMM PF00070; match to protein family HMM PF07992. | 0.788 |
| ABK71070.1 | ppa | MSMEG_4434 | MSMEG_6114 | Cof protein; Identified by match to protein family HMM PF00702; match to protein family HMM PF05116; match to protein family HMM TIGR00099; match to protein family HMM TIGR01484. | Inorganic pyrophosphatase; Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions. | 0.487 |
| ABK73468.1 | ABK71070.1 | MSMEG_4431 | MSMEG_4434 | Putative regulatory protein; Identified by match to protein family HMM PF00196. | Cof protein; Identified by match to protein family HMM PF00702; match to protein family HMM PF05116; match to protein family HMM TIGR00099; match to protein family HMM TIGR01484. | 0.563 |
| ABK73468.1 | ABK73606.1 | MSMEG_4431 | MSMEG_4432 | Putative regulatory protein; Identified by match to protein family HMM PF00196. | Hypothetical protein; Identified by Glimmer2; putative. | 0.761 |
| ABK73468.1 | ABK75372.1 | MSMEG_4431 | MSMEG_4433 | Putative regulatory protein; Identified by match to protein family HMM PF00196. | Dehydrogenase; Identified by match to protein family HMM PF00070; match to protein family HMM PF07992. | 0.616 |
| ABK73606.1 | ABK71070.1 | MSMEG_4432 | MSMEG_4434 | Hypothetical protein; Identified by Glimmer2; putative. | Cof protein; Identified by match to protein family HMM PF00702; match to protein family HMM PF05116; match to protein family HMM TIGR00099; match to protein family HMM TIGR01484. | 0.566 |
| ABK73606.1 | ABK73468.1 | MSMEG_4432 | MSMEG_4431 | Hypothetical protein; Identified by Glimmer2; putative. | Putative regulatory protein; Identified by match to protein family HMM PF00196. | 0.761 |
| ABK73606.1 | ABK75372.1 | MSMEG_4432 | MSMEG_4433 | Hypothetical protein; Identified by Glimmer2; putative. | Dehydrogenase; Identified by match to protein family HMM PF00070; match to protein family HMM PF07992. | 0.566 |
| ABK73923.1 | ABK75372.1 | MSMEG_0848 | MSMEG_4433 | NADH ubiquinone oxidoreductase subunit 5; Identified by match to protein family HMM PF00361; match to protein family HMM PF04039. | Dehydrogenase; Identified by match to protein family HMM PF00070; match to protein family HMM PF07992. | 0.458 |
| ABK73923.1 | nuoL | MSMEG_0848 | MSMEG_2052 | NADH ubiquinone oxidoreductase subunit 5; Identified by match to protein family HMM PF00361; match to protein family HMM PF04039. | NADH-quinone oxidoreductase, L subunit; Identified by match to protein family HMM PF00361; match to protein family HMM PF00662; match to protein family HMM TIGR01974. | 0.901 |
| ABK73923.1 | ppa | MSMEG_0848 | MSMEG_6114 | NADH ubiquinone oxidoreductase subunit 5; Identified by match to protein family HMM PF00361; match to protein family HMM PF04039. | Inorganic pyrophosphatase; Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions. | 0.590 |
| ABK75372.1 | ABK70782.1 | MSMEG_4433 | MSMEG_6530 | Dehydrogenase; Identified by match to protein family HMM PF00070; match to protein family HMM PF07992. | Cytochrome c oxidase subunit III family protein; Identified by match to protein family HMM PF00510. | 0.434 |
| ABK75372.1 | ABK71070.1 | MSMEG_4433 | MSMEG_4434 | Dehydrogenase; Identified by match to protein family HMM PF00070; match to protein family HMM PF07992. | Cof protein; Identified by match to protein family HMM PF00702; match to protein family HMM PF05116; match to protein family HMM TIGR00099; match to protein family HMM TIGR01484. | 0.788 |
| ABK75372.1 | ABK73468.1 | MSMEG_4433 | MSMEG_4431 | Dehydrogenase; Identified by match to protein family HMM PF00070; match to protein family HMM PF07992. | Putative regulatory protein; Identified by match to protein family HMM PF00196. | 0.616 |
| ABK75372.1 | ABK73606.1 | MSMEG_4433 | MSMEG_4432 | Dehydrogenase; Identified by match to protein family HMM PF00070; match to protein family HMM PF07992. | Hypothetical protein; Identified by Glimmer2; putative. | 0.566 |
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