STRINGSTRING
ABK71070.1 ABK71070.1 ABK75372.1 ABK75372.1 ABK73606.1 ABK73606.1 ABK73468.1 ABK73468.1 ppa ppa pgi pgi ABK74333.1 ABK74333.1 ABK73679.1 ABK73679.1 ABK70188.1 ABK70188.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK71070.1Cof protein; Identified by match to protein family HMM PF00702; match to protein family HMM PF05116; match to protein family HMM TIGR00099; match to protein family HMM TIGR01484. (270 aa)    
Predicted Functional Partners:
ABK75372.1
Dehydrogenase; Identified by match to protein family HMM PF00070; match to protein family HMM PF07992.
  
    0.788
ABK73606.1
Hypothetical protein; Identified by Glimmer2; putative.
  
    0.566
ABK73468.1
Putative regulatory protein; Identified by match to protein family HMM PF00196.
       0.563
ppa
Inorganic pyrophosphatase; Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions.
 
  
 0.487
pgi
Glucose-6-phosphate isomerase; Identified by similarity to SP:P11537; match to protein family HMM PF00342; Belongs to the GPI family.
  
  
 0.434
ABK74333.1
dTDP-glucose 4,6-dehydratase.
 
 
 0.420
ABK73679.1
Transferase.
  
  
 0.407
ABK70188.1
Dihydrokaempferol 4-reductase; Identified by match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF07993.
 
 
 0.400
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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