Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ABK69683.1 | ABK70134.1 | MSMEG_4435 | MSMEG_4438 | Dimethylmenaquinone methyltransferase. | Hypothetical protein; Identified by Glimmer2; putative. | 0.777 |
| ABK69683.1 | ABK70264.1 | MSMEG_4435 | MSMEG_4439 | Dimethylmenaquinone methyltransferase. | Acetyltransferase; Identified by match to protein family HMM PF00583. | 0.656 |
| ABK69683.1 | ABK70828.1 | MSMEG_4435 | MSMEG_4440 | Dimethylmenaquinone methyltransferase. | Glucose-1-dehydrogenase; Identified by match to protein family HMM PF00106. | 0.647 |
| ABK69683.1 | ABK71756.1 | MSMEG_4435 | MSMEG_4441 | Dimethylmenaquinone methyltransferase. | Cupin domain protein; Identified by match to protein family HMM PF07883. | 0.584 |
| ABK69683.1 | ABK72455.1 | MSMEG_4435 | MSMEG_4444 | Dimethylmenaquinone methyltransferase. | Hypothetical protein; Identified by Glimmer2; putative. | 0.440 |
| ABK69683.1 | ABK74088.1 | MSMEG_4435 | MSMEG_4436 | Dimethylmenaquinone methyltransferase. | Transketolase; Identified by match to protein family HMM PF00456; match to protein family HMM PF02779; match to protein family HMM PF02780. | 0.776 |
| ABK69683.1 | ctaD | MSMEG_4435 | MSMEG_4437 | Dimethylmenaquinone methyltransferase. | Cytochrome c oxidase, subunit I; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B. | 0.787 |
| ABK70134.1 | ABK69683.1 | MSMEG_4438 | MSMEG_4435 | Hypothetical protein; Identified by Glimmer2; putative. | Dimethylmenaquinone methyltransferase. | 0.777 |
| ABK70134.1 | ABK70264.1 | MSMEG_4438 | MSMEG_4439 | Hypothetical protein; Identified by Glimmer2; putative. | Acetyltransferase; Identified by match to protein family HMM PF00583. | 0.642 |
| ABK70134.1 | ABK70828.1 | MSMEG_4438 | MSMEG_4440 | Hypothetical protein; Identified by Glimmer2; putative. | Glucose-1-dehydrogenase; Identified by match to protein family HMM PF00106. | 0.642 |
| ABK70134.1 | ABK71756.1 | MSMEG_4438 | MSMEG_4441 | Hypothetical protein; Identified by Glimmer2; putative. | Cupin domain protein; Identified by match to protein family HMM PF07883. | 0.572 |
| ABK70134.1 | ABK72455.1 | MSMEG_4438 | MSMEG_4444 | Hypothetical protein; Identified by Glimmer2; putative. | Hypothetical protein; Identified by Glimmer2; putative. | 0.439 |
| ABK70134.1 | ABK74088.1 | MSMEG_4438 | MSMEG_4436 | Hypothetical protein; Identified by Glimmer2; putative. | Transketolase; Identified by match to protein family HMM PF00456; match to protein family HMM PF02779; match to protein family HMM PF02780. | 0.777 |
| ABK70134.1 | ctaD | MSMEG_4438 | MSMEG_4437 | Hypothetical protein; Identified by Glimmer2; putative. | Cytochrome c oxidase, subunit I; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B. | 0.773 |
| ABK70264.1 | ABK69683.1 | MSMEG_4439 | MSMEG_4435 | Acetyltransferase; Identified by match to protein family HMM PF00583. | Dimethylmenaquinone methyltransferase. | 0.656 |
| ABK70264.1 | ABK70134.1 | MSMEG_4439 | MSMEG_4438 | Acetyltransferase; Identified by match to protein family HMM PF00583. | Hypothetical protein; Identified by Glimmer2; putative. | 0.642 |
| ABK70264.1 | ABK70828.1 | MSMEG_4439 | MSMEG_4440 | Acetyltransferase; Identified by match to protein family HMM PF00583. | Glucose-1-dehydrogenase; Identified by match to protein family HMM PF00106. | 0.827 |
| ABK70264.1 | ABK71756.1 | MSMEG_4439 | MSMEG_4441 | Acetyltransferase; Identified by match to protein family HMM PF00583. | Cupin domain protein; Identified by match to protein family HMM PF07883. | 0.739 |
| ABK70264.1 | ABK72455.1 | MSMEG_4439 | MSMEG_4444 | Acetyltransferase; Identified by match to protein family HMM PF00583. | Hypothetical protein; Identified by Glimmer2; putative. | 0.519 |
| ABK70264.1 | ABK74088.1 | MSMEG_4439 | MSMEG_4436 | Acetyltransferase; Identified by match to protein family HMM PF00583. | Transketolase; Identified by match to protein family HMM PF00456; match to protein family HMM PF02779; match to protein family HMM PF02780. | 0.662 |
page 1 of 3