Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABK69862.1 | ABK75377.1 | MSMEG_4449 | MSMEG_4450 | Putative transcriptional regulator; Identified by match to protein family HMM PF00440. | Alpha/beta hydrolase. | 0.756 |
ABK69862.1 | ABK76074.1 | MSMEG_4449 | MSMEG_4451 | Putative transcriptional regulator; Identified by match to protein family HMM PF00440. | Probable monooxygenase. | 0.558 |
ABK70182.1 | ABK72073.1 | MSMEG_1213 | MSMEG_6711 | Cytochrome P450 monooxygenase; Identified by match to protein family HMM PF00067; Belongs to the cytochrome P450 family. | 4-hydroxybenzoate transporter; Identified by match to protein family HMM PF00083; match to protein family HMM PF06779; match to protein family HMM PF07690. | 0.452 |
ABK70182.1 | ABK76062.1 | MSMEG_1213 | MSMEG_4009 | Cytochrome P450 monooxygenase; Identified by match to protein family HMM PF00067; Belongs to the cytochrome P450 family. | Vanillate O-demethylase oxidoreductase; Identified by match to protein family HMM PF00111. | 0.722 |
ABK70182.1 | ABK76074.1 | MSMEG_1213 | MSMEG_4451 | Cytochrome P450 monooxygenase; Identified by match to protein family HMM PF00067; Belongs to the cytochrome P450 family. | Probable monooxygenase. | 0.551 |
ABK70976.1 | ABK72073.1 | MSMEG_3693 | MSMEG_6711 | Cytochrome P450 monooxygenase; Identified by match to protein family HMM PF00067; Belongs to the cytochrome P450 family. | 4-hydroxybenzoate transporter; Identified by match to protein family HMM PF00083; match to protein family HMM PF06779; match to protein family HMM PF07690. | 0.454 |
ABK70976.1 | ABK76062.1 | MSMEG_3693 | MSMEG_4009 | Cytochrome P450 monooxygenase; Identified by match to protein family HMM PF00067; Belongs to the cytochrome P450 family. | Vanillate O-demethylase oxidoreductase; Identified by match to protein family HMM PF00111. | 0.722 |
ABK70976.1 | ABK76074.1 | MSMEG_3693 | MSMEG_4451 | Cytochrome P450 monooxygenase; Identified by match to protein family HMM PF00067; Belongs to the cytochrome P450 family. | Probable monooxygenase. | 0.550 |
ABK71893.1 | ABK72073.1 | MSMEG_6622 | MSMEG_6711 | Cytochrome P450 monooxygenase; Identified by match to protein family HMM PF00067; Belongs to the cytochrome P450 family. | 4-hydroxybenzoate transporter; Identified by match to protein family HMM PF00083; match to protein family HMM PF06779; match to protein family HMM PF07690. | 0.452 |
ABK71893.1 | ABK76062.1 | MSMEG_6622 | MSMEG_4009 | Cytochrome P450 monooxygenase; Identified by match to protein family HMM PF00067; Belongs to the cytochrome P450 family. | Vanillate O-demethylase oxidoreductase; Identified by match to protein family HMM PF00111. | 0.724 |
ABK71893.1 | ABK76074.1 | MSMEG_6622 | MSMEG_4451 | Cytochrome P450 monooxygenase; Identified by match to protein family HMM PF00067; Belongs to the cytochrome P450 family. | Probable monooxygenase. | 0.551 |
ABK72073.1 | ABK70182.1 | MSMEG_6711 | MSMEG_1213 | 4-hydroxybenzoate transporter; Identified by match to protein family HMM PF00083; match to protein family HMM PF06779; match to protein family HMM PF07690. | Cytochrome P450 monooxygenase; Identified by match to protein family HMM PF00067; Belongs to the cytochrome P450 family. | 0.452 |
ABK72073.1 | ABK70976.1 | MSMEG_6711 | MSMEG_3693 | 4-hydroxybenzoate transporter; Identified by match to protein family HMM PF00083; match to protein family HMM PF06779; match to protein family HMM PF07690. | Cytochrome P450 monooxygenase; Identified by match to protein family HMM PF00067; Belongs to the cytochrome P450 family. | 0.454 |
ABK72073.1 | ABK71893.1 | MSMEG_6711 | MSMEG_6622 | 4-hydroxybenzoate transporter; Identified by match to protein family HMM PF00083; match to protein family HMM PF06779; match to protein family HMM PF07690. | Cytochrome P450 monooxygenase; Identified by match to protein family HMM PF00067; Belongs to the cytochrome P450 family. | 0.452 |
ABK72073.1 | ABK73179.1 | MSMEG_6711 | MSMEG_5100 | 4-hydroxybenzoate transporter; Identified by match to protein family HMM PF00083; match to protein family HMM PF06779; match to protein family HMM PF07690. | Pyruvate ferredoxin/flavodoxin oxidoreductase family protein; Identified by match to protein family HMM PF01558. | 0.591 |
ABK72073.1 | ABK75075.1 | MSMEG_6711 | MSMEG_1775 | 4-hydroxybenzoate transporter; Identified by match to protein family HMM PF00083; match to protein family HMM PF06779; match to protein family HMM PF07690. | Cytochrome P450 monooxygenase. | 0.450 |
ABK72073.1 | ABK76062.1 | MSMEG_6711 | MSMEG_4009 | 4-hydroxybenzoate transporter; Identified by match to protein family HMM PF00083; match to protein family HMM PF06779; match to protein family HMM PF07690. | Vanillate O-demethylase oxidoreductase; Identified by match to protein family HMM PF00111. | 0.661 |
ABK72073.1 | ABK76074.1 | MSMEG_6711 | MSMEG_4451 | 4-hydroxybenzoate transporter; Identified by match to protein family HMM PF00083; match to protein family HMM PF06779; match to protein family HMM PF07690. | Probable monooxygenase. | 0.549 |
ABK73179.1 | ABK72073.1 | MSMEG_5100 | MSMEG_6711 | Pyruvate ferredoxin/flavodoxin oxidoreductase family protein; Identified by match to protein family HMM PF01558. | 4-hydroxybenzoate transporter; Identified by match to protein family HMM PF00083; match to protein family HMM PF06779; match to protein family HMM PF07690. | 0.591 |
ABK73179.1 | ABK76062.1 | MSMEG_5100 | MSMEG_4009 | Pyruvate ferredoxin/flavodoxin oxidoreductase family protein; Identified by match to protein family HMM PF01558. | Vanillate O-demethylase oxidoreductase; Identified by match to protein family HMM PF00111. | 0.732 |
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