STRINGSTRING
ABK71253.1 ABK71253.1 ltaE ltaE ABK69932.1 ABK69932.1 ABK74932.1 ABK74932.1 ABK76074.1 ABK76074.1 ABK75377.1 ABK75377.1 ABK75130.1 ABK75130.1 ABK70168.1 ABK70168.1 ABK75054.1 ABK75054.1 ABK72953.1 ABK72953.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK71253.1Conserved hypothetical protein. (119 aa)    
Predicted Functional Partners:
ltaE
L-threonine aldolase, low-specificity; Identified by similarity to SP:O50584; match to protein family HMM PF00282; match to protein family HMM PF01212.
  
    0.690
ABK69932.1
Integral membrane protein.
 
    0.665
ABK74932.1
Conserved hypothetical protein.
  
    0.445
ABK76074.1
Probable monooxygenase.
  
    0.438
ABK75377.1
Alpha/beta hydrolase.
  
    0.436
ABK75130.1
Arylsulfatase; Identified by match to protein family HMM PF00884.
  
    0.425
ABK70168.1
Beta-lactamase; Identified by match to protein family HMM PF00144.
  
    0.417
ABK75054.1
Identified by match to protein family HMM PF00753.
  
     0.413
ABK72953.1
Conserved hypothetical protein.
  
    0.411
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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