STRINGSTRING
ABK76011.1 ABK76011.1 ABK74651.1 ABK74651.1 ABK73397.1 ABK73397.1 ABK69648.1 ABK69648.1 ABK75545.1 ABK75545.1 ABK75566.1 ABK75566.1 ABK74604.1 ABK74604.1 ABK72685.1 ABK72685.1 ABK69833.1 ABK69833.1 ABK74862.1 ABK74862.1 eccE1 eccE1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK76011.1Conserved hypothetical protein. (271 aa)    
Predicted Functional Partners:
ABK74651.1
Putative membrane protein; Identified by match to protein family HMM PF08044.
  
  
 0.761
ABK73397.1
Conserved hypothetical protein.
  
     0.723
ABK69648.1
Putative transcriptional regulatory protein; Identified by match to protein family HMM PF00440.
 
    0.697
ABK75545.1
Conserved hypothetical protein.
  
  
 0.697
ABK75566.1
Identified by match to protein family HMM PF02810; match to protein family HMM PF07721.
  
    0.689
ABK74604.1
Regulatory protein, AsnC/Lrp; Identified by match to protein family HMM PF01037.
  
    0.673
ABK72685.1
Conserved hypothetical protein.
 
    0.660
ABK69833.1
Conserved hypothetical protein.
  
    0.655
ABK74862.1
Conserved hypothetical protein.
  
  
 0.651
eccE1
Conserved hypothetical protein; Part of the ESX-1 / type VII specialized secretion system (T7SS), which exports several proteins including EsxA and EsxB. Plays a role in DNA conjugation, in at least a donor strain.
  
    0.650
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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