Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABK69648.1 | ABK72685.1 | MSMEG_0676 | MSMEG_4771 | Putative transcriptional regulatory protein; Identified by match to protein family HMM PF00440. | Conserved hypothetical protein. | 0.718 |
ABK69648.1 | ABK73397.1 | MSMEG_0676 | MSMEG_5694 | Putative transcriptional regulatory protein; Identified by match to protein family HMM PF00440. | Conserved hypothetical protein. | 0.630 |
ABK69648.1 | ABK74651.1 | MSMEG_0676 | MSMEG_6902 | Putative transcriptional regulatory protein; Identified by match to protein family HMM PF00440. | Putative membrane protein; Identified by match to protein family HMM PF08044. | 0.532 |
ABK69648.1 | ABK75566.1 | MSMEG_0676 | MSMEG_1285 | Putative transcriptional regulatory protein; Identified by match to protein family HMM PF00440. | Identified by match to protein family HMM PF02810; match to protein family HMM PF07721. | 0.484 |
ABK69648.1 | ABK76011.1 | MSMEG_0676 | MSMEG_4456 | Putative transcriptional regulatory protein; Identified by match to protein family HMM PF00440. | Conserved hypothetical protein. | 0.697 |
ABK69833.1 | ABK72685.1 | MSMEG_0071 | MSMEG_4771 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.804 |
ABK69833.1 | ABK73397.1 | MSMEG_0071 | MSMEG_5694 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.498 |
ABK69833.1 | ABK74651.1 | MSMEG_0071 | MSMEG_6902 | Conserved hypothetical protein. | Putative membrane protein; Identified by match to protein family HMM PF08044. | 0.546 |
ABK69833.1 | ABK74862.1 | MSMEG_0071 | MSMEG_1188 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.822 |
ABK69833.1 | ABK75545.1 | MSMEG_0071 | MSMEG_3531 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.785 |
ABK69833.1 | ABK75566.1 | MSMEG_0071 | MSMEG_1285 | Conserved hypothetical protein. | Identified by match to protein family HMM PF02810; match to protein family HMM PF07721. | 0.770 |
ABK69833.1 | ABK76011.1 | MSMEG_0071 | MSMEG_4456 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.655 |
ABK69833.1 | eccE1 | MSMEG_0071 | MSMEG_0082 | Conserved hypothetical protein. | Conserved hypothetical protein; Part of the ESX-1 / type VII specialized secretion system (T7SS), which exports several proteins including EsxA and EsxB. Plays a role in DNA conjugation, in at least a donor strain. | 0.785 |
ABK72685.1 | ABK69648.1 | MSMEG_4771 | MSMEG_0676 | Conserved hypothetical protein. | Putative transcriptional regulatory protein; Identified by match to protein family HMM PF00440. | 0.718 |
ABK72685.1 | ABK69833.1 | MSMEG_4771 | MSMEG_0071 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.804 |
ABK72685.1 | ABK73397.1 | MSMEG_4771 | MSMEG_5694 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.703 |
ABK72685.1 | ABK74651.1 | MSMEG_4771 | MSMEG_6902 | Conserved hypothetical protein. | Putative membrane protein; Identified by match to protein family HMM PF08044. | 0.575 |
ABK72685.1 | ABK75545.1 | MSMEG_4771 | MSMEG_3531 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.460 |
ABK72685.1 | ABK75566.1 | MSMEG_4771 | MSMEG_1285 | Conserved hypothetical protein. | Identified by match to protein family HMM PF02810; match to protein family HMM PF07721. | 0.443 |
ABK72685.1 | ABK76011.1 | MSMEG_4771 | MSMEG_4456 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.660 |
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