Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABK69939.1 | ABK72338.1 | MSMEG_6005 | MSMEG_4471 | Conserved hypothetical protein. | MarR-family protein transcriptional regulator; Identified by match to protein family HMM PF01047. | 0.539 |
ABK69939.1 | ABK72500.1 | MSMEG_6005 | MSMEG_6006 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.991 |
ABK70004.1 | ABK71243.1 | MSMEG_4472 | MSMEG_4470 | Multidrug-efflux transporter protein; Identified by match to protein family HMM PF07690. | ABC transporter; Identified by match to protein family HMM PF00005. | 0.546 |
ABK70004.1 | ABK72338.1 | MSMEG_4472 | MSMEG_4471 | Multidrug-efflux transporter protein; Identified by match to protein family HMM PF07690. | MarR-family protein transcriptional regulator; Identified by match to protein family HMM PF01047. | 0.950 |
ABK70004.1 | ABK74483.1 | MSMEG_4472 | MSMEG_4469 | Multidrug-efflux transporter protein; Identified by match to protein family HMM PF07690. | Cobalt transport protein; Identified by match to protein family HMM PF02361. | 0.553 |
ABK71079.1 | ABK72338.1 | MSMEG_6140 | MSMEG_4471 | Membrane protein. | MarR-family protein transcriptional regulator; Identified by match to protein family HMM PF01047. | 0.471 |
ABK71243.1 | ABK70004.1 | MSMEG_4470 | MSMEG_4472 | ABC transporter; Identified by match to protein family HMM PF00005. | Multidrug-efflux transporter protein; Identified by match to protein family HMM PF07690. | 0.546 |
ABK71243.1 | ABK72338.1 | MSMEG_4470 | MSMEG_4471 | ABC transporter; Identified by match to protein family HMM PF00005. | MarR-family protein transcriptional regulator; Identified by match to protein family HMM PF01047. | 0.604 |
ABK71243.1 | ABK74483.1 | MSMEG_4470 | MSMEG_4469 | ABC transporter; Identified by match to protein family HMM PF00005. | Cobalt transport protein; Identified by match to protein family HMM PF02361. | 0.990 |
ABK72199.1 | ABK72338.1 | MSMEG_1515 | MSMEG_4471 | Two-component sensor histidine kinase; Identified by match to protein family HMM PF00027; match to protein family HMM PF02518. | MarR-family protein transcriptional regulator; Identified by match to protein family HMM PF01047. | 0.572 |
ABK72338.1 | ABK69939.1 | MSMEG_4471 | MSMEG_6005 | MarR-family protein transcriptional regulator; Identified by match to protein family HMM PF01047. | Conserved hypothetical protein. | 0.539 |
ABK72338.1 | ABK70004.1 | MSMEG_4471 | MSMEG_4472 | MarR-family protein transcriptional regulator; Identified by match to protein family HMM PF01047. | Multidrug-efflux transporter protein; Identified by match to protein family HMM PF07690. | 0.950 |
ABK72338.1 | ABK71079.1 | MSMEG_4471 | MSMEG_6140 | MarR-family protein transcriptional regulator; Identified by match to protein family HMM PF01047. | Membrane protein. | 0.471 |
ABK72338.1 | ABK71243.1 | MSMEG_4471 | MSMEG_4470 | MarR-family protein transcriptional regulator; Identified by match to protein family HMM PF01047. | ABC transporter; Identified by match to protein family HMM PF00005. | 0.604 |
ABK72338.1 | ABK72199.1 | MSMEG_4471 | MSMEG_1515 | MarR-family protein transcriptional regulator; Identified by match to protein family HMM PF01047. | Two-component sensor histidine kinase; Identified by match to protein family HMM PF00027; match to protein family HMM PF02518. | 0.572 |
ABK72338.1 | ABK72500.1 | MSMEG_4471 | MSMEG_6006 | MarR-family protein transcriptional regulator; Identified by match to protein family HMM PF01047. | Conserved hypothetical protein. | 0.437 |
ABK72338.1 | ABK74483.1 | MSMEG_4471 | MSMEG_4469 | MarR-family protein transcriptional regulator; Identified by match to protein family HMM PF01047. | Cobalt transport protein; Identified by match to protein family HMM PF02361. | 0.785 |
ABK72500.1 | ABK69939.1 | MSMEG_6006 | MSMEG_6005 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.991 |
ABK72500.1 | ABK72338.1 | MSMEG_6006 | MSMEG_4471 | Conserved hypothetical protein. | MarR-family protein transcriptional regulator; Identified by match to protein family HMM PF01047. | 0.437 |
ABK74483.1 | ABK70004.1 | MSMEG_4469 | MSMEG_4472 | Cobalt transport protein; Identified by match to protein family HMM PF02361. | Multidrug-efflux transporter protein; Identified by match to protein family HMM PF07690. | 0.553 |
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