Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABK70004.1 | ABK70399.1 | MSMEG_4472 | MSMEG_3319 | Multidrug-efflux transporter protein; Identified by match to protein family HMM PF07690. | Identified by match to protein family HMM PF00440. | 0.481 |
ABK70004.1 | ABK70454.1 | MSMEG_4472 | MSMEG_1224 | Multidrug-efflux transporter protein; Identified by match to protein family HMM PF07690. | Rifampin ADP-ribosyl transferase. | 0.597 |
ABK70004.1 | ABK71231.1 | MSMEG_4472 | MSMEG_1221 | Multidrug-efflux transporter protein; Identified by match to protein family HMM PF07690. | Rifampin ADP-ribosyl transferase. | 0.602 |
ABK70004.1 | ABK71243.1 | MSMEG_4472 | MSMEG_4470 | Multidrug-efflux transporter protein; Identified by match to protein family HMM PF07690. | ABC transporter; Identified by match to protein family HMM PF00005. | 0.546 |
ABK70004.1 | ABK72079.1 | MSMEG_4472 | MSMEG_0188 | Multidrug-efflux transporter protein; Identified by match to protein family HMM PF07690. | MarR-family protein transcriptional regulator; Identified by match to protein family HMM PF01047. | 0.629 |
ABK70004.1 | ABK72338.1 | MSMEG_4472 | MSMEG_4471 | Multidrug-efflux transporter protein; Identified by match to protein family HMM PF07690. | MarR-family protein transcriptional regulator; Identified by match to protein family HMM PF01047. | 0.950 |
ABK70004.1 | ABK72491.1 | MSMEG_4472 | MSMEG_4915 | Multidrug-efflux transporter protein; Identified by match to protein family HMM PF07690. | Identified by match to protein family HMM PF00343; match to protein family HMM TIGR02094. | 0.485 |
ABK70004.1 | ABK73204.1 | MSMEG_4472 | MSMEG_2947 | Multidrug-efflux transporter protein; Identified by match to protein family HMM PF07690. | Polyketide cyclase; Identified by match to protein family HMM PF04199. | 0.441 |
ABK70004.1 | ABK73302.1 | MSMEG_4472 | MSMEG_3563 | Multidrug-efflux transporter protein; Identified by match to protein family HMM PF07690. | Drug transporter; Identified by match to protein family HMM PF07690; match to protein family HMM TIGR00711; Belongs to the major facilitator superfamily. | 0.495 |
ABK70004.1 | ABK74483.1 | MSMEG_4472 | MSMEG_4469 | Multidrug-efflux transporter protein; Identified by match to protein family HMM PF07690. | Cobalt transport protein; Identified by match to protein family HMM PF02361. | 0.553 |
ABK70399.1 | ABK70004.1 | MSMEG_3319 | MSMEG_4472 | Identified by match to protein family HMM PF00440. | Multidrug-efflux transporter protein; Identified by match to protein family HMM PF07690. | 0.481 |
ABK70454.1 | ABK70004.1 | MSMEG_1224 | MSMEG_4472 | Rifampin ADP-ribosyl transferase. | Multidrug-efflux transporter protein; Identified by match to protein family HMM PF07690. | 0.597 |
ABK71231.1 | ABK70004.1 | MSMEG_1221 | MSMEG_4472 | Rifampin ADP-ribosyl transferase. | Multidrug-efflux transporter protein; Identified by match to protein family HMM PF07690. | 0.602 |
ABK71243.1 | ABK70004.1 | MSMEG_4470 | MSMEG_4472 | ABC transporter; Identified by match to protein family HMM PF00005. | Multidrug-efflux transporter protein; Identified by match to protein family HMM PF07690. | 0.546 |
ABK71243.1 | ABK72338.1 | MSMEG_4470 | MSMEG_4471 | ABC transporter; Identified by match to protein family HMM PF00005. | MarR-family protein transcriptional regulator; Identified by match to protein family HMM PF01047. | 0.604 |
ABK71243.1 | ABK74483.1 | MSMEG_4470 | MSMEG_4469 | ABC transporter; Identified by match to protein family HMM PF00005. | Cobalt transport protein; Identified by match to protein family HMM PF02361. | 0.990 |
ABK72079.1 | ABK70004.1 | MSMEG_0188 | MSMEG_4472 | MarR-family protein transcriptional regulator; Identified by match to protein family HMM PF01047. | Multidrug-efflux transporter protein; Identified by match to protein family HMM PF07690. | 0.629 |
ABK72338.1 | ABK70004.1 | MSMEG_4471 | MSMEG_4472 | MarR-family protein transcriptional regulator; Identified by match to protein family HMM PF01047. | Multidrug-efflux transporter protein; Identified by match to protein family HMM PF07690. | 0.950 |
ABK72338.1 | ABK71243.1 | MSMEG_4471 | MSMEG_4470 | MarR-family protein transcriptional regulator; Identified by match to protein family HMM PF01047. | ABC transporter; Identified by match to protein family HMM PF00005. | 0.604 |
ABK72338.1 | ABK74483.1 | MSMEG_4471 | MSMEG_4469 | MarR-family protein transcriptional regulator; Identified by match to protein family HMM PF01047. | Cobalt transport protein; Identified by match to protein family HMM PF02361. | 0.785 |
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