STRINGSTRING
ABK75842.1 ABK75842.1 uppS uppS ABK73645.1 ABK73645.1 recO recO ABK72107.1 ABK72107.1 ABK72671.1 ABK72671.1 ABK72891.1 ABK72891.1 ABK74693.1 ABK74693.1 ABK70706.1 ABK70706.1 ABK72868.1 ABK72868.1 ABK74778.1 ABK74778.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
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[Homology]
Score
ABK75842.1Conserved hypothetical protein. (154 aa)    
Predicted Functional Partners:
uppS
Undecaprenyl diphosphate synthase; Catalyzes the sequential condensation of isopentenyl diphosphate (IPP) in the cis configuration with (2Z,6E)-farnesyl diphosphate (Z-FPP or EZ-FPP) generating the 50 carbon product trans,polycis-decaprenyl diphosphate. When (2E,6E)-farnesyl diphosphate (E-FPP or EE-FPP) is used in vitro, both primary products decaprenyl diphosphate and heptaprenyl diphosphate are synthesized. It is probably due to the fact that M.smegmatis synthesizes both (2E,6E,10E)- geranylgeranyl diphosphate (EEE-GGPP) and (2E,6E,10Z)-geranylgeranyl diphosphate (EEZ-GGPP). Can als [...]
  
  
 0.976
ABK73645.1
Identified by match to protein family HMM PF00293.
  
  
 0.956
recO
DNA repair protein RecO; Involved in DNA repair and RecF pathway recombination.
  
  
 0.954
ABK72107.1
Amidase; Identified by match to protein family HMM PF01425; Belongs to the amidase family.
  
    0.798
ABK72671.1
Conserved hypothetical protein.
  
    0.777
ABK72891.1
Conserved hypothetical protein.
  
    0.770
ABK74693.1
Conserved hypothetical protein.
  
    0.767
ABK70706.1
Probable exported protein.
  
    0.767
ABK72868.1
Conserved hypothetical protein.
  
    0.761
ABK74778.1
Probable conserved transmembrane protein.
  
    0.759
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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