node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABK70204.1 | ABK70673.1 | MSMEG_5028 | MSMEG_4502 | HIT family protein; Identified by match to protein family HMM PF01230. | Conserved hypothetical protein; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit. | 0.619 |
ABK70204.1 | ABK71911.1 | MSMEG_5028 | MSMEG_0016 | HIT family protein; Identified by match to protein family HMM PF01230. | Conserved domain protein; Identified by match to protein family HMM PF03621. | 0.591 |
ABK70204.1 | ABK74499.1 | MSMEG_5028 | MSMEG_6214 | HIT family protein; Identified by match to protein family HMM PF01230. | GatB/Yqey domain protein; Identified by match to protein family HMM PF02637. | 0.618 |
ABK70673.1 | ABK70204.1 | MSMEG_4502 | MSMEG_5028 | Conserved hypothetical protein; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit. | HIT family protein; Identified by match to protein family HMM PF01230. | 0.619 |
ABK70673.1 | ABK71911.1 | MSMEG_4502 | MSMEG_0016 | Conserved hypothetical protein; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit. | Conserved domain protein; Identified by match to protein family HMM PF03621. | 0.603 |
ABK70673.1 | ABK74499.1 | MSMEG_4502 | MSMEG_6214 | Conserved hypothetical protein; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit. | GatB/Yqey domain protein; Identified by match to protein family HMM PF02637. | 0.656 |
ABK70673.1 | dnaJ-2 | MSMEG_4502 | MSMEG_4504 | Conserved hypothetical protein; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit. | Chaperone protein DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, D [...] | 0.940 |
ABK70673.1 | hrcA | MSMEG_4502 | MSMEG_4505 | Conserved hypothetical protein; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit. | Heat-inducible transcription repressor HrcA; Negative regulator of class I heat shock genes (grpE-dnaK- dnaJ and groELS operons). Prevents heat-shock induction of these operons. | 0.741 |
ABK70673.1 | mraW | MSMEG_4502 | MSMEG_4235 | Conserved hypothetical protein; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit. | S-adenosyl-methyltransferase MraW; Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA. | 0.707 |
ABK70673.1 | rlmN | MSMEG_4502 | MSMEG_2545 | Conserved hypothetical protein; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit. | Radical SAM enzyme, Cfr family protein; Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs; Belongs to the radical SAM superfamily. RlmN family. | 0.612 |
ABK70673.1 | rsmI | MSMEG_4502 | MSMEG_5445 | Conserved hypothetical protein; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit. | Conserved hypothetical protein; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA. | 0.632 |
ABK70673.1 | sun | MSMEG_4502 | MSMEG_3065 | Conserved hypothetical protein; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit. | Ribosomal RNA small subunit methyltransferase B; Identified by match to protein family HMM PF01029; match to protein family HMM PF01189; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. | 0.620 |
ABK70673.1 | trmD | MSMEG_4502 | MSMEG_2438 | Conserved hypothetical protein; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit. | tRNA (guanine-N1)-methyltransferase; Specifically methylates guanosine-37 in various tRNAs. Belongs to the RNA methyltransferase TrmD family. | 0.691 |
ABK71911.1 | ABK70204.1 | MSMEG_0016 | MSMEG_5028 | Conserved domain protein; Identified by match to protein family HMM PF03621. | HIT family protein; Identified by match to protein family HMM PF01230. | 0.591 |
ABK71911.1 | ABK70673.1 | MSMEG_0016 | MSMEG_4502 | Conserved domain protein; Identified by match to protein family HMM PF03621. | Conserved hypothetical protein; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit. | 0.603 |
ABK71911.1 | ABK74499.1 | MSMEG_0016 | MSMEG_6214 | Conserved domain protein; Identified by match to protein family HMM PF03621. | GatB/Yqey domain protein; Identified by match to protein family HMM PF02637. | 0.585 |
ABK74499.1 | ABK70204.1 | MSMEG_6214 | MSMEG_5028 | GatB/Yqey domain protein; Identified by match to protein family HMM PF02637. | HIT family protein; Identified by match to protein family HMM PF01230. | 0.618 |
ABK74499.1 | ABK70673.1 | MSMEG_6214 | MSMEG_4502 | GatB/Yqey domain protein; Identified by match to protein family HMM PF02637. | Conserved hypothetical protein; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit. | 0.656 |
ABK74499.1 | ABK71911.1 | MSMEG_6214 | MSMEG_0016 | GatB/Yqey domain protein; Identified by match to protein family HMM PF02637. | Conserved domain protein; Identified by match to protein family HMM PF03621. | 0.585 |
dnaJ-2 | ABK70673.1 | MSMEG_4504 | MSMEG_4502 | Chaperone protein DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, D [...] | Conserved hypothetical protein; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit. | 0.940 |