Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ABK71857.1 | ABK72010.1 | MSMEG_4519 | MSMEG_4520 | NrtC protein. | Sulfate/thiosulfate import ATP-binding protein CysA; Identified by match to protein family HMM PF00005. | 0.874 |
| ABK71857.1 | ABK73013.1 | MSMEG_4519 | MSMEG_0259 | NrtC protein. | enoyl-CoA hydratase/isomerase; Identified by match to protein family HMM PF00378. | 0.624 |
| ABK71857.1 | ABK73549.1 | MSMEG_4519 | MSMEG_4521 | NrtC protein. | Tat (twin-arginine translocation) pathway signal sequence; Identified by match to protein family HMM TIGR01409. | 0.960 |
| ABK71857.1 | ABK73774.1 | MSMEG_4519 | MSMEG_4518 | NrtC protein. | Conserved hypothetical protein. | 0.960 |
| ABK71857.1 | ABK74289.1 | MSMEG_4519 | MSMEG_4523 | NrtC protein. | Binding-protein-dependent transport systems inner membrane component; Identified by match to protein family HMM PF00528. | 0.900 |
| ABK71857.1 | ABK74376.1 | MSMEG_4519 | MSMEG_4852 | NrtC protein. | enoyl-CoA hydratase, putative; Identified by match to protein family HMM PF00378. | 0.621 |
| ABK71857.1 | ABK74920.1 | MSMEG_4519 | MSMEG_4517 | NrtC protein. | TetR-type transcriptional regulator of sulfur metabolism; Identified by match to protein family HMM PF00440. | 0.760 |
| ABK71857.1 | ABK75990.1 | MSMEG_4519 | MSMEG_5720 | NrtC protein. | Putative 3-hydroxyacyl-CoA dehydrogenase; Identified by match to protein family HMM PF00378; match to protein family HMM PF00725; match to protein family HMM PF02737. | 0.696 |
| ABK71857.1 | cynS | MSMEG_4519 | MSMEG_5359 | NrtC protein. | Cyanate hydratase; Catalyzes the reaction of cyanate with bicarbonate to produce ammonia and carbon dioxide; Belongs to the cyanase family. | 0.647 |
| ABK71857.1 | pks | MSMEG_4519 | MSMEG_0408 | NrtC protein. | Type I modular polyketide synthase; Identified by match to protein family HMM PF00106; match to protein family HMM PF00107; match to protein family HMM PF00109; match to protein family HMM PF00550; match to protein family HMM PF00698; match to protein family HMM PF01370; match to protein family HMM PF02801. | 0.696 |
| ABK72010.1 | ABK71857.1 | MSMEG_4520 | MSMEG_4519 | Sulfate/thiosulfate import ATP-binding protein CysA; Identified by match to protein family HMM PF00005. | NrtC protein. | 0.874 |
| ABK72010.1 | ABK73549.1 | MSMEG_4520 | MSMEG_4521 | Sulfate/thiosulfate import ATP-binding protein CysA; Identified by match to protein family HMM PF00005. | Tat (twin-arginine translocation) pathway signal sequence; Identified by match to protein family HMM TIGR01409. | 0.929 |
| ABK72010.1 | ABK73774.1 | MSMEG_4520 | MSMEG_4518 | Sulfate/thiosulfate import ATP-binding protein CysA; Identified by match to protein family HMM PF00005. | Conserved hypothetical protein. | 0.866 |
| ABK72010.1 | ABK74289.1 | MSMEG_4520 | MSMEG_4523 | Sulfate/thiosulfate import ATP-binding protein CysA; Identified by match to protein family HMM PF00005. | Binding-protein-dependent transport systems inner membrane component; Identified by match to protein family HMM PF00528. | 0.924 |
| ABK72010.1 | ABK74920.1 | MSMEG_4520 | MSMEG_4517 | Sulfate/thiosulfate import ATP-binding protein CysA; Identified by match to protein family HMM PF00005. | TetR-type transcriptional regulator of sulfur metabolism; Identified by match to protein family HMM PF00440. | 0.563 |
| ABK73013.1 | ABK71857.1 | MSMEG_0259 | MSMEG_4519 | enoyl-CoA hydratase/isomerase; Identified by match to protein family HMM PF00378. | NrtC protein. | 0.624 |
| ABK73013.1 | ABK74376.1 | MSMEG_0259 | MSMEG_4852 | enoyl-CoA hydratase/isomerase; Identified by match to protein family HMM PF00378. | enoyl-CoA hydratase, putative; Identified by match to protein family HMM PF00378. | 0.704 |
| ABK73013.1 | pks | MSMEG_0259 | MSMEG_0408 | enoyl-CoA hydratase/isomerase; Identified by match to protein family HMM PF00378. | Type I modular polyketide synthase; Identified by match to protein family HMM PF00106; match to protein family HMM PF00107; match to protein family HMM PF00109; match to protein family HMM PF00550; match to protein family HMM PF00698; match to protein family HMM PF01370; match to protein family HMM PF02801. | 0.613 |
| ABK73549.1 | ABK71857.1 | MSMEG_4521 | MSMEG_4519 | Tat (twin-arginine translocation) pathway signal sequence; Identified by match to protein family HMM TIGR01409. | NrtC protein. | 0.960 |
| ABK73549.1 | ABK72010.1 | MSMEG_4521 | MSMEG_4520 | Tat (twin-arginine translocation) pathway signal sequence; Identified by match to protein family HMM TIGR01409. | Sulfate/thiosulfate import ATP-binding protein CysA; Identified by match to protein family HMM PF00005. | 0.929 |
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