Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ABK71607.1 | ABK72010.1 | MSMEG_3854 | MSMEG_4520 | Putative aliphatic sulfonates transport permease protein SsuC; Identified by match to protein family HMM PF00528. | Sulfate/thiosulfate import ATP-binding protein CysA; Identified by match to protein family HMM PF00005. | 0.439 |
| ABK71607.1 | ABK73549.1 | MSMEG_3854 | MSMEG_4521 | Putative aliphatic sulfonates transport permease protein SsuC; Identified by match to protein family HMM PF00528. | Tat (twin-arginine translocation) pathway signal sequence; Identified by match to protein family HMM TIGR01409. | 0.603 |
| ABK71685.1 | ABK72010.1 | MSMEG_0549 | MSMEG_4520 | ABC transporter, permease protein; Identified by match to protein family HMM PF00528. | Sulfate/thiosulfate import ATP-binding protein CysA; Identified by match to protein family HMM PF00005. | 0.507 |
| ABK71685.1 | ABK73549.1 | MSMEG_0549 | MSMEG_4521 | ABC transporter, permease protein; Identified by match to protein family HMM PF00528. | Tat (twin-arginine translocation) pathway signal sequence; Identified by match to protein family HMM TIGR01409. | 0.621 |
| ABK71857.1 | ABK72010.1 | MSMEG_4519 | MSMEG_4520 | NrtC protein. | Sulfate/thiosulfate import ATP-binding protein CysA; Identified by match to protein family HMM PF00005. | 0.874 |
| ABK71857.1 | ABK73549.1 | MSMEG_4519 | MSMEG_4521 | NrtC protein. | Tat (twin-arginine translocation) pathway signal sequence; Identified by match to protein family HMM TIGR01409. | 0.960 |
| ABK71857.1 | ABK73774.1 | MSMEG_4519 | MSMEG_4518 | NrtC protein. | Conserved hypothetical protein. | 0.960 |
| ABK71857.1 | ABK74289.1 | MSMEG_4519 | MSMEG_4523 | NrtC protein. | Binding-protein-dependent transport systems inner membrane component; Identified by match to protein family HMM PF00528. | 0.900 |
| ABK71857.1 | ABK74920.1 | MSMEG_4519 | MSMEG_4517 | NrtC protein. | TetR-type transcriptional regulator of sulfur metabolism; Identified by match to protein family HMM PF00440. | 0.760 |
| ABK72010.1 | ABK71607.1 | MSMEG_4520 | MSMEG_3854 | Sulfate/thiosulfate import ATP-binding protein CysA; Identified by match to protein family HMM PF00005. | Putative aliphatic sulfonates transport permease protein SsuC; Identified by match to protein family HMM PF00528. | 0.439 |
| ABK72010.1 | ABK71685.1 | MSMEG_4520 | MSMEG_0549 | Sulfate/thiosulfate import ATP-binding protein CysA; Identified by match to protein family HMM PF00005. | ABC transporter, permease protein; Identified by match to protein family HMM PF00528. | 0.507 |
| ABK72010.1 | ABK71857.1 | MSMEG_4520 | MSMEG_4519 | Sulfate/thiosulfate import ATP-binding protein CysA; Identified by match to protein family HMM PF00005. | NrtC protein. | 0.874 |
| ABK72010.1 | ABK73549.1 | MSMEG_4520 | MSMEG_4521 | Sulfate/thiosulfate import ATP-binding protein CysA; Identified by match to protein family HMM PF00005. | Tat (twin-arginine translocation) pathway signal sequence; Identified by match to protein family HMM TIGR01409. | 0.929 |
| ABK72010.1 | ABK73774.1 | MSMEG_4520 | MSMEG_4518 | Sulfate/thiosulfate import ATP-binding protein CysA; Identified by match to protein family HMM PF00005. | Conserved hypothetical protein. | 0.866 |
| ABK72010.1 | ABK74289.1 | MSMEG_4520 | MSMEG_4523 | Sulfate/thiosulfate import ATP-binding protein CysA; Identified by match to protein family HMM PF00005. | Binding-protein-dependent transport systems inner membrane component; Identified by match to protein family HMM PF00528. | 0.924 |
| ABK72010.1 | ABK74920.1 | MSMEG_4520 | MSMEG_4517 | Sulfate/thiosulfate import ATP-binding protein CysA; Identified by match to protein family HMM PF00005. | TetR-type transcriptional regulator of sulfur metabolism; Identified by match to protein family HMM PF00440. | 0.563 |
| ABK72010.1 | ABK74926.1 | MSMEG_4520 | MSMEG_0113 | Sulfate/thiosulfate import ATP-binding protein CysA; Identified by match to protein family HMM PF00005. | Taurine transport system permease protein TauC; Identified by match to protein family HMM PF00528. | 0.504 |
| ABK73549.1 | ABK71607.1 | MSMEG_4521 | MSMEG_3854 | Tat (twin-arginine translocation) pathway signal sequence; Identified by match to protein family HMM TIGR01409. | Putative aliphatic sulfonates transport permease protein SsuC; Identified by match to protein family HMM PF00528. | 0.603 |
| ABK73549.1 | ABK71685.1 | MSMEG_4521 | MSMEG_0549 | Tat (twin-arginine translocation) pathway signal sequence; Identified by match to protein family HMM TIGR01409. | ABC transporter, permease protein; Identified by match to protein family HMM PF00528. | 0.621 |
| ABK73549.1 | ABK71857.1 | MSMEG_4521 | MSMEG_4519 | Tat (twin-arginine translocation) pathway signal sequence; Identified by match to protein family HMM TIGR01409. | NrtC protein. | 0.960 |
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