Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ABK71033.1 | ABK71955.1 | MSMEG_4533 | MSMEG_1245 | Identified by match to protein family HMM TIGR00971. | Phosphoadenosine phosphosulfate reductase; Identified by match to protein family HMM PF01507. | 0.656 |
| ABK71033.1 | ABK73833.1 | MSMEG_4533 | MSMEG_2014 | Identified by match to protein family HMM TIGR00971. | Molybdenum import ATP-binding protein ModC; Identified by match to protein family HMM PF00005; match to protein family HMM PF03459; Belongs to the ABC transporter superfamily. | 0.789 |
| ABK71033.1 | ABK74127.1 | MSMEG_4533 | MSMEG_4527 | Identified by match to protein family HMM TIGR00971. | Ferredoxin sulfite reductase; Identified by match to protein family HMM PF01077; match to protein family HMM PF03460; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family. | 0.647 |
| ABK71033.1 | cysA | MSMEG_4533 | MSMEG_4530 | Identified by match to protein family HMM TIGR00971. | Sulfate ABC transporter, ATP-binding protein; Part of the ABC transporter complex CysAWTP involved in sulfate/thiosulfate import. Responsible for energy coupling to the transport system. | 0.999 |
| ABK71033.1 | cysD | MSMEG_4533 | MSMEG_4979 | Identified by match to protein family HMM TIGR00971. | Sulfate adenylyltransferase, small subunit; Identified by similarity to SP:P21156; match to protein family HMM PF01507; match to protein family HMM TIGR02039. | 0.978 |
| ABK71033.1 | cysH | MSMEG_4533 | MSMEG_4528 | Identified by match to protein family HMM TIGR00971. | Phosphoadenosine phosphosulfate reductase; Reduction of activated sulfate into sulfite. Belongs to the PAPS reductase family. CysH subfamily. | 0.823 |
| ABK71033.1 | cysNC | MSMEG_4533 | MSMEG_4978 | Identified by match to protein family HMM TIGR00971. | Sulfate adenylytransferase, large subunit/adenylylsulfate kinase; Catalyzes the synthesis of activated sulfate. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN/NodQ subfamily. | 0.998 |
| ABK71033.1 | cysT | MSMEG_4533 | MSMEG_4532 | Identified by match to protein family HMM TIGR00971. | Sulfate ABC transporter, permease protein CysT; Part of the ABC transporter complex (TC 3.A.1.6.1) involved in sulfate/thiosulfate import. | 0.999 |
| ABK71033.1 | cysW | MSMEG_4533 | MSMEG_4531 | Identified by match to protein family HMM TIGR00971. | Sulfate ABC transporter, permease protein CysW; Identified by match to protein family HMM PF00528; match to protein family HMM TIGR00969; match to protein family HMM TIGR02140. | 0.999 |
| ABK71955.1 | ABK71033.1 | MSMEG_1245 | MSMEG_4533 | Phosphoadenosine phosphosulfate reductase; Identified by match to protein family HMM PF01507. | Identified by match to protein family HMM TIGR00971. | 0.656 |
| ABK71955.1 | ABK73833.1 | MSMEG_1245 | MSMEG_2014 | Phosphoadenosine phosphosulfate reductase; Identified by match to protein family HMM PF01507. | Molybdenum import ATP-binding protein ModC; Identified by match to protein family HMM PF00005; match to protein family HMM PF03459; Belongs to the ABC transporter superfamily. | 0.513 |
| ABK71955.1 | ABK74127.1 | MSMEG_1245 | MSMEG_4527 | Phosphoadenosine phosphosulfate reductase; Identified by match to protein family HMM PF01507. | Ferredoxin sulfite reductase; Identified by match to protein family HMM PF01077; match to protein family HMM PF03460; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family. | 0.648 |
| ABK71955.1 | cysA | MSMEG_1245 | MSMEG_4530 | Phosphoadenosine phosphosulfate reductase; Identified by match to protein family HMM PF01507. | Sulfate ABC transporter, ATP-binding protein; Part of the ABC transporter complex CysAWTP involved in sulfate/thiosulfate import. Responsible for energy coupling to the transport system. | 0.515 |
| ABK71955.1 | cysNC | MSMEG_1245 | MSMEG_4978 | Phosphoadenosine phosphosulfate reductase; Identified by match to protein family HMM PF01507. | Sulfate adenylytransferase, large subunit/adenylylsulfate kinase; Catalyzes the synthesis of activated sulfate. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN/NodQ subfamily. | 0.998 |
| ABK71955.1 | cysT | MSMEG_1245 | MSMEG_4532 | Phosphoadenosine phosphosulfate reductase; Identified by match to protein family HMM PF01507. | Sulfate ABC transporter, permease protein CysT; Part of the ABC transporter complex (TC 3.A.1.6.1) involved in sulfate/thiosulfate import. | 0.669 |
| ABK71955.1 | cysW | MSMEG_1245 | MSMEG_4531 | Phosphoadenosine phosphosulfate reductase; Identified by match to protein family HMM PF01507. | Sulfate ABC transporter, permease protein CysW; Identified by match to protein family HMM PF00528; match to protein family HMM TIGR00969; match to protein family HMM TIGR02140. | 0.656 |
| ABK73833.1 | ABK71033.1 | MSMEG_2014 | MSMEG_4533 | Molybdenum import ATP-binding protein ModC; Identified by match to protein family HMM PF00005; match to protein family HMM PF03459; Belongs to the ABC transporter superfamily. | Identified by match to protein family HMM TIGR00971. | 0.789 |
| ABK73833.1 | ABK71955.1 | MSMEG_2014 | MSMEG_1245 | Molybdenum import ATP-binding protein ModC; Identified by match to protein family HMM PF00005; match to protein family HMM PF03459; Belongs to the ABC transporter superfamily. | Phosphoadenosine phosphosulfate reductase; Identified by match to protein family HMM PF01507. | 0.513 |
| ABK73833.1 | ABK74127.1 | MSMEG_2014 | MSMEG_4527 | Molybdenum import ATP-binding protein ModC; Identified by match to protein family HMM PF00005; match to protein family HMM PF03459; Belongs to the ABC transporter superfamily. | Ferredoxin sulfite reductase; Identified by match to protein family HMM PF01077; match to protein family HMM PF03460; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family. | 0.692 |
| ABK73833.1 | cysD | MSMEG_2014 | MSMEG_4979 | Molybdenum import ATP-binding protein ModC; Identified by match to protein family HMM PF00005; match to protein family HMM PF03459; Belongs to the ABC transporter superfamily. | Sulfate adenylyltransferase, small subunit; Identified by similarity to SP:P21156; match to protein family HMM PF01507; match to protein family HMM TIGR02039. | 0.508 |
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