STRINGSTRING
ABK73354.1 ABK73354.1 ABK72890.1 ABK72890.1 ABK71204.1 ABK71204.1 ABK71912.1 ABK71912.1 ABK75474.1 ABK75474.1 ABK71989.1 ABK71989.1 ABK70577.1 ABK70577.1 ABK75720.1 ABK75720.1 ABK74541.1 ABK74541.1 ABK73554.1 ABK73554.1 ABK70743.1 ABK70743.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK73354.1Conserved hypothetical protein. (406 aa)    
Predicted Functional Partners:
ABK72890.1
Conserved hypothetical protein.
  
     0.772
ABK71204.1
Rmt3 protein.
  
    0.725
ABK71912.1
Conserved hypothetical protein.
  
     0.684
ABK75474.1
Conserved hypothetical protein.
  
     0.674
ABK71989.1
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.669
ABK70577.1
Hypothetical protein; Identified by Glimmer2; putative.
 
     0.623
ABK75720.1
Integral membrane protein DUF6; Identified by match to protein family HMM PF00892.
  
    0.619
ABK74541.1
Hypothetical protein; Identified by Glimmer2; putative.
  
    0.610
ABK73554.1
Gp15 protein.
  
     0.607
ABK70743.1
Major membrane protein I.
 
   0.603
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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