Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ABK70000.1 | ABK70743.1 | MSMEG_6466 | MSMEG_4537 | Aquaporin Z; Identified by match to protein family HMM PF00230; match to protein family HMM TIGR00861; Belongs to the MIP/aquaporin (TC 1.A.8) family. | Major membrane protein I. | 0.675 |
| ABK70000.1 | ABK73673.1 | MSMEG_6466 | MSMEG_6758 | Aquaporin Z; Identified by match to protein family HMM PF00230; match to protein family HMM TIGR00861; Belongs to the MIP/aquaporin (TC 1.A.8) family. | Transport integral membrane protein; Identified by match to protein family HMM PF00230; match to protein family HMM TIGR00861; Belongs to the MIP/aquaporin (TC 1.A.8) family. | 0.417 |
| ABK70000.1 | saeC | MSMEG_6466 | MSMEG_0046 | Aquaporin Z; Identified by match to protein family HMM PF00230; match to protein family HMM TIGR00861; Belongs to the MIP/aquaporin (TC 1.A.8) family. | Conserved hypothetical protein; May be involved in assembly of the ESX-1 / type VII specialized secretion system (T7SS), which exports several proteins including EsxA and EsxB. Involved in DNA conjugation in recipient (MKD8) strain. | 0.561 |
| ABK70743.1 | ABK70000.1 | MSMEG_4537 | MSMEG_6466 | Major membrane protein I. | Aquaporin Z; Identified by match to protein family HMM PF00230; match to protein family HMM TIGR00861; Belongs to the MIP/aquaporin (TC 1.A.8) family. | 0.675 |
| ABK70743.1 | ABK70818.1 | MSMEG_4537 | MSMEG_4540 | Major membrane protein I. | Identified by match to protein family HMM PF00583. | 0.622 |
| ABK70743.1 | ABK71907.1 | MSMEG_4537 | MSMEG_3578 | Major membrane protein I. | Putative cyclase; Identified by match to protein family HMM PF00211; match to protein family HMM PF00672. | 0.618 |
| ABK70743.1 | ABK72038.1 | MSMEG_4537 | MSMEG_2124 | Major membrane protein I. | Glycerol uptake facilitator, MIP channel; Identified by match to protein family HMM PF00230; Belongs to the MIP/aquaporin (TC 1.A.8) family. | 0.679 |
| ABK70743.1 | ABK73354.1 | MSMEG_4537 | MSMEG_4536 | Major membrane protein I. | Conserved hypothetical protein. | 0.603 |
| ABK70743.1 | ABK73673.1 | MSMEG_4537 | MSMEG_6758 | Major membrane protein I. | Transport integral membrane protein; Identified by match to protein family HMM PF00230; match to protein family HMM TIGR00861; Belongs to the MIP/aquaporin (TC 1.A.8) family. | 0.674 |
| ABK70743.1 | ABK74617.1 | MSMEG_4537 | MSMEG_4538 | Major membrane protein I. | Cysteine desulphurase, SufS; Identified by match to protein family HMM PF00266; match to protein family HMM PF01212; match to protein family HMM TIGR01979; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. | 0.968 |
| ABK70743.1 | ABK75261.1 | MSMEG_4537 | MSMEG_4477 | Major membrane protein I. | Hydrolase, alpha/beta hydrolase fold family protein; Identified by match to protein family HMM PF00561. | 0.601 |
| ABK70743.1 | pks | MSMEG_4537 | MSMEG_0408 | Major membrane protein I. | Type I modular polyketide synthase; Identified by match to protein family HMM PF00106; match to protein family HMM PF00107; match to protein family HMM PF00109; match to protein family HMM PF00550; match to protein family HMM PF00698; match to protein family HMM PF01370; match to protein family HMM PF02801. | 0.644 |
| ABK70743.1 | saeC | MSMEG_4537 | MSMEG_0046 | Major membrane protein I. | Conserved hypothetical protein; May be involved in assembly of the ESX-1 / type VII specialized secretion system (T7SS), which exports several proteins including EsxA and EsxB. Involved in DNA conjugation in recipient (MKD8) strain. | 0.733 |
| ABK70818.1 | ABK70743.1 | MSMEG_4540 | MSMEG_4537 | Identified by match to protein family HMM PF00583. | Major membrane protein I. | 0.622 |
| ABK70818.1 | ABK73354.1 | MSMEG_4540 | MSMEG_4536 | Identified by match to protein family HMM PF00583. | Conserved hypothetical protein. | 0.420 |
| ABK70818.1 | ABK74617.1 | MSMEG_4540 | MSMEG_4538 | Identified by match to protein family HMM PF00583. | Cysteine desulphurase, SufS; Identified by match to protein family HMM PF00266; match to protein family HMM PF01212; match to protein family HMM TIGR01979; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. | 0.567 |
| ABK71907.1 | ABK70743.1 | MSMEG_3578 | MSMEG_4537 | Putative cyclase; Identified by match to protein family HMM PF00211; match to protein family HMM PF00672. | Major membrane protein I. | 0.618 |
| ABK71907.1 | ABK75261.1 | MSMEG_3578 | MSMEG_4477 | Putative cyclase; Identified by match to protein family HMM PF00211; match to protein family HMM PF00672. | Hydrolase, alpha/beta hydrolase fold family protein; Identified by match to protein family HMM PF00561. | 0.830 |
| ABK71907.1 | saeC | MSMEG_3578 | MSMEG_0046 | Putative cyclase; Identified by match to protein family HMM PF00211; match to protein family HMM PF00672. | Conserved hypothetical protein; May be involved in assembly of the ESX-1 / type VII specialized secretion system (T7SS), which exports several proteins including EsxA and EsxB. Involved in DNA conjugation in recipient (MKD8) strain. | 0.436 |
| ABK72038.1 | ABK70743.1 | MSMEG_2124 | MSMEG_4537 | Glycerol uptake facilitator, MIP channel; Identified by match to protein family HMM PF00230; Belongs to the MIP/aquaporin (TC 1.A.8) family. | Major membrane protein I. | 0.679 |
page 1 of 3