STRINGSTRING
ABK71219.1 ABK71219.1 ABK70392.1 ABK70392.1 ABK70148.1 ABK70148.1 ABK76120.1 ABK76120.1 ABK72094.1 ABK72094.1 ABK75694.1 ABK75694.1 ABK72574.1 ABK72574.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK71219.1Transposase; Identified by match to protein family HMM PF01548; match to protein family HMM PF02371. (401 aa)    
Predicted Functional Partners:
ABK70392.1
Transposase, Mutator family protein; Required for the transposition of the insertion element.
 
  
 0.521
ABK70148.1
Identified by match to protein family HMM PF08028.
  
    0.464
ABK76120.1
Amino acid permease-associated region, putative; Identified by match to protein family HMM PF00324.
  
    0.458
ABK72094.1
Identified by match to protein family HMM PF00583.
  
    0.455
ABK75694.1
IS6120, transposase; Required for the transposition of the insertion element.
 
   
 0.402
ABK72574.1
IS6120, transposase; Identified by similarity to SP:P35883; match to protein family HMM PF00872.
 
   
 0.402
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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