Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABK70710.1 | ABK71667.1 | MSMEG_3668 | MSMEG_4551 | acyl-CoA dehydrogenase; Identified by match to protein family HMM PF08028. | Monoxygenase. | 0.598 |
ABK70934.1 | ABK71667.1 | MSMEG_3259 | MSMEG_4551 | acyl-CoA dehydrogenase; Identified by match to protein family HMM PF08028. | Monoxygenase. | 0.624 |
ABK71667.1 | ABK70710.1 | MSMEG_4551 | MSMEG_3668 | Monoxygenase. | acyl-CoA dehydrogenase; Identified by match to protein family HMM PF08028. | 0.598 |
ABK71667.1 | ABK70934.1 | MSMEG_4551 | MSMEG_3259 | Monoxygenase. | acyl-CoA dehydrogenase; Identified by match to protein family HMM PF08028. | 0.624 |
ABK71667.1 | ABK72495.1 | MSMEG_4551 | MSMEG_3852 | Monoxygenase. | Aliphatic sulfonate binding protein; Identified by match to protein family HMM TIGR01728. | 0.741 |
ABK71667.1 | ABK73261.1 | MSMEG_4551 | MSMEG_5001 | Monoxygenase. | Pesticide degrading monooxygenase; Identified by match to protein family HMM PF08028. | 0.627 |
ABK71667.1 | ABK74421.1 | MSMEG_4551 | MSMEG_2478 | Monoxygenase. | Identified by match to protein family HMM PF01557. | 0.597 |
ABK71667.1 | ABK74734.1 | MSMEG_4551 | MSMEG_4097 | Monoxygenase. | acyl-CoA dehydrogenase domain protein; Identified by match to protein family HMM PF08028. | 0.670 |
ABK71667.1 | ssuB | MSMEG_4551 | MSMEG_3853 | Monoxygenase. | Putative aliphatic sulfonates transport ATP-binding protein SsuB; Part of the ABC transporter complex SsuABC involved in aliphatic sulfonates import. Responsible for energy coupling to the transport system. | 0.695 |
ABK71667.1 | ssuB-2 | MSMEG_4551 | MSMEG_4587 | Monoxygenase. | Putative aliphatic sulfonates transport ATP-binding protein SsuB; Part of the ABC transporter complex SsuABC involved in aliphatic sulfonates import. Responsible for energy coupling to the transport system. | 0.695 |
ABK71667.1 | ssuB-3 | MSMEG_4551 | MSMEG_5531 | Monoxygenase. | ABC transporter ATP-binding protein; Part of the ABC transporter complex SsuABC involved in aliphatic sulfonates import. Responsible for energy coupling to the transport system. | 0.694 |
ABK71667.1 | ssuD-6 | MSMEG_4551 | MSMEG_4552 | Monoxygenase. | Nitrilotriacetate monooxygenase component A; Identified by match to protein family HMM PF00296. | 0.829 |
ABK72495.1 | ABK71667.1 | MSMEG_3852 | MSMEG_4551 | Aliphatic sulfonate binding protein; Identified by match to protein family HMM TIGR01728. | Monoxygenase. | 0.741 |
ABK72495.1 | ABK74421.1 | MSMEG_3852 | MSMEG_2478 | Aliphatic sulfonate binding protein; Identified by match to protein family HMM TIGR01728. | Identified by match to protein family HMM PF01557. | 0.836 |
ABK72495.1 | ssuB | MSMEG_3852 | MSMEG_3853 | Aliphatic sulfonate binding protein; Identified by match to protein family HMM TIGR01728. | Putative aliphatic sulfonates transport ATP-binding protein SsuB; Part of the ABC transporter complex SsuABC involved in aliphatic sulfonates import. Responsible for energy coupling to the transport system. | 0.997 |
ABK72495.1 | ssuB-2 | MSMEG_3852 | MSMEG_4587 | Aliphatic sulfonate binding protein; Identified by match to protein family HMM TIGR01728. | Putative aliphatic sulfonates transport ATP-binding protein SsuB; Part of the ABC transporter complex SsuABC involved in aliphatic sulfonates import. Responsible for energy coupling to the transport system. | 0.994 |
ABK72495.1 | ssuB-3 | MSMEG_3852 | MSMEG_5531 | Aliphatic sulfonate binding protein; Identified by match to protein family HMM TIGR01728. | ABC transporter ATP-binding protein; Part of the ABC transporter complex SsuABC involved in aliphatic sulfonates import. Responsible for energy coupling to the transport system. | 0.993 |
ABK72495.1 | ssuD-6 | MSMEG_3852 | MSMEG_4552 | Aliphatic sulfonate binding protein; Identified by match to protein family HMM TIGR01728. | Nitrilotriacetate monooxygenase component A; Identified by match to protein family HMM PF00296. | 0.407 |
ABK73261.1 | ABK71667.1 | MSMEG_5001 | MSMEG_4551 | Pesticide degrading monooxygenase; Identified by match to protein family HMM PF08028. | Monoxygenase. | 0.627 |
ABK74421.1 | ABK71667.1 | MSMEG_2478 | MSMEG_4551 | Identified by match to protein family HMM PF01557. | Monoxygenase. | 0.597 |
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