STRINGSTRING
ABK75852.1 ABK75852.1 ABK75734.1 ABK75734.1 ABK69622.1 ABK69622.1 ABK75826.1 ABK75826.1 ABK74369.1 ABK74369.1 rpsT rpsT ABK71701.1 ABK71701.1 ABK73214.1 ABK73214.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK75852.1Conserved hypothetical protein; Identified by match to protein family HMM PF01841. (279 aa)    
Predicted Functional Partners:
ABK75734.1
Conserved hypothetical protein; Identified by similarity to GP:22294891; match to protein family HMM PF04168.
 
  
 0.992
ABK69622.1
Conserved hypothetical protein; Identified by match to protein family HMM PF04169; match to protein family HMM PF04174.
 
  
 0.990
ABK75826.1
Conserved hypothetical protein; Identified by match to protein family HMM PF04168; match to protein family HMM PF04169; match to protein family HMM PF04174.
 
  
 0.898
ABK74369.1
Conserved hypothetical protein; Identified by match to protein family HMM PF01841.
 
    0.770
rpsT
Ribosomal protein S20; Binds directly to 16S ribosomal RNA.
  
    0.566
ABK71701.1
Conserved hypothetical protein.
 
    0.540
ABK73214.1
ATPase family protein associated with various cellular activities (AAA); Identified by match to protein family HMM PF01882; match to protein family HMM PF07726; match to protein family HMM PF07728.
  
  
 0.461
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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