Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ABK70147.1 | ABK72291.1 | MSMEG_0746 | MSMEG_4583 | Carbon-monoxide dehydrogenase, large subunit; Identified by match to protein family HMM PF01315; match to protein family HMM PF02738; match to protein family HMM TIGR02416. | ATPase associated with various cellular activities; Identified by match to protein family HMM PF07728. | 0.604 |
| ABK70147.1 | ABK75014.1 | MSMEG_0746 | MSMEG_0751 | Carbon-monoxide dehydrogenase, large subunit; Identified by match to protein family HMM PF01315; match to protein family HMM PF02738; match to protein family HMM TIGR02416. | Conserved hypothetical protein; Identified by match to protein family HMM PF05762. | 0.935 |
| ABK71654.1 | ABK72291.1 | MSMEG_4579 | MSMEG_4583 | Identified by match to protein family HMM PF00300; Belongs to the phosphoglycerate mutase family. | ATPase associated with various cellular activities; Identified by match to protein family HMM PF07728. | 0.693 |
| ABK71654.1 | ABK73991.1 | MSMEG_4579 | MSMEG_4582 | Identified by match to protein family HMM PF00300; Belongs to the phosphoglycerate mutase family. | Conserved hypothetical protein; Identified by match to protein family HMM PF05762. | 0.698 |
| ABK71654.1 | ABK74624.1 | MSMEG_4579 | MSMEG_4577 | Identified by match to protein family HMM PF00300; Belongs to the phosphoglycerate mutase family. | Identified by match to protein family HMM PF02645; match to protein family HMM TIGR00762. | 0.903 |
| ABK71654.1 | nadD | MSMEG_4579 | MSMEG_4581 | Identified by match to protein family HMM PF00300; Belongs to the phosphoglycerate mutase family. | Nicotinate (nicotinamide) nucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD). | 0.913 |
| ABK71654.1 | octT | MSMEG_4579 | MSMEG_4578 | Identified by match to protein family HMM PF00300; Belongs to the phosphoglycerate mutase family. | Conserved hypothetical protein; Sugar octanoyltransferase likely involved in the biosynthesis of mycobacterial methylglucose lipopolysaccharide (MGLP). Catalyzes the transfer of an octanoyl group from octanoyl-CoA to the C6 OH of the second glucose in diglucosylglycerate (DGG). DGG is the preferred acceptor, but to a lesser extent, GG (glucosylglycerate) can also be used as substrate. DGG and GG are the two earliest intermediates in MGLP biosynthesis; Belongs to the OctT acyltransferase family. | 0.899 |
| ABK71654.1 | proA | MSMEG_4579 | MSMEG_4584 | Identified by match to protein family HMM PF00300; Belongs to the phosphoglycerate mutase family. | Gamma-glutamyl phosphate reductase; Catalyzes the NADPH-dependent reduction of L-glutamate 5- phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5-carboxylate. Belongs to the gamma-glutamyl phosphate reductase family. | 0.629 |
| ABK71654.1 | rsfS | MSMEG_4579 | MSMEG_4580 | Identified by match to protein family HMM PF00300; Belongs to the phosphoglycerate mutase family. | Conserved domain protein; Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation. | 0.900 |
| ABK72291.1 | ABK70147.1 | MSMEG_4583 | MSMEG_0746 | ATPase associated with various cellular activities; Identified by match to protein family HMM PF07728. | Carbon-monoxide dehydrogenase, large subunit; Identified by match to protein family HMM PF01315; match to protein family HMM PF02738; match to protein family HMM TIGR02416. | 0.604 |
| ABK72291.1 | ABK71654.1 | MSMEG_4583 | MSMEG_4579 | ATPase associated with various cellular activities; Identified by match to protein family HMM PF07728. | Identified by match to protein family HMM PF00300; Belongs to the phosphoglycerate mutase family. | 0.693 |
| ABK72291.1 | ABK73991.1 | MSMEG_4583 | MSMEG_4582 | ATPase associated with various cellular activities; Identified by match to protein family HMM PF07728. | Conserved hypothetical protein; Identified by match to protein family HMM PF05762. | 0.975 |
| ABK72291.1 | ABK74624.1 | MSMEG_4583 | MSMEG_4577 | ATPase associated with various cellular activities; Identified by match to protein family HMM PF07728. | Identified by match to protein family HMM PF02645; match to protein family HMM TIGR00762. | 0.697 |
| ABK72291.1 | ABK74817.1 | MSMEG_4583 | MSMEG_6240 | ATPase associated with various cellular activities; Identified by match to protein family HMM PF07728. | Conserved hypothetical protein; Identified by match to protein family HMM PF05762. | 0.781 |
| ABK72291.1 | ABK75014.1 | MSMEG_4583 | MSMEG_0751 | ATPase associated with various cellular activities; Identified by match to protein family HMM PF07728. | Conserved hypothetical protein; Identified by match to protein family HMM PF05762. | 0.784 |
| ABK72291.1 | nadD | MSMEG_4583 | MSMEG_4581 | ATPase associated with various cellular activities; Identified by match to protein family HMM PF07728. | Nicotinate (nicotinamide) nucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD). | 0.692 |
| ABK72291.1 | octT | MSMEG_4583 | MSMEG_4578 | ATPase associated with various cellular activities; Identified by match to protein family HMM PF07728. | Conserved hypothetical protein; Sugar octanoyltransferase likely involved in the biosynthesis of mycobacterial methylglucose lipopolysaccharide (MGLP). Catalyzes the transfer of an octanoyl group from octanoyl-CoA to the C6 OH of the second glucose in diglucosylglycerate (DGG). DGG is the preferred acceptor, but to a lesser extent, GG (glucosylglycerate) can also be used as substrate. DGG and GG are the two earliest intermediates in MGLP biosynthesis; Belongs to the OctT acyltransferase family. | 0.690 |
| ABK72291.1 | proA | MSMEG_4583 | MSMEG_4584 | ATPase associated with various cellular activities; Identified by match to protein family HMM PF07728. | Gamma-glutamyl phosphate reductase; Catalyzes the NADPH-dependent reduction of L-glutamate 5- phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5-carboxylate. Belongs to the gamma-glutamyl phosphate reductase family. | 0.847 |
| ABK72291.1 | rsfS | MSMEG_4583 | MSMEG_4580 | ATPase associated with various cellular activities; Identified by match to protein family HMM PF07728. | Conserved domain protein; Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation. | 0.738 |
| ABK73991.1 | ABK71654.1 | MSMEG_4582 | MSMEG_4579 | Conserved hypothetical protein; Identified by match to protein family HMM PF05762. | Identified by match to protein family HMM PF00300; Belongs to the phosphoglycerate mutase family. | 0.698 |
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