Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ABK69971.1 | ABK70813.1 | MSMEG_4591 | MSMEG_4592 | Hypothetical protein; Identified by Glimmer2; putative. | Identified by match to protein family HMM PF00441; match to protein family HMM PF08028. | 0.574 |
| ABK69971.1 | ABK72349.1 | MSMEG_4591 | MSMEG_4586 | Hypothetical protein; Identified by Glimmer2; putative. | ABC nitrate/sulfonate/bicarbonate family protein transporter, periplasmic ligand binding protein. | 0.523 |
| ABK69971.1 | ABK73818.1 | MSMEG_4591 | MSMEG_4589 | Hypothetical protein; Identified by Glimmer2; putative. | Rhodanese domain protein/cystathionine beta-lyase. | 0.518 |
| ABK69971.1 | ABK74762.1 | MSMEG_4591 | MSMEG_4588 | Hypothetical protein; Identified by Glimmer2; putative. | ABC nitrate/sulfonate/bicarbonate family protein transporter, inner membrane subunit; Identified by match to protein family HMM PF00528. | 0.516 |
| ABK69971.1 | ABK76066.1 | MSMEG_4591 | MSMEG_4593 | Hypothetical protein; Identified by Glimmer2; putative. | acyl-CoA dehydrogenase. | 0.528 |
| ABK69971.1 | ssuB-2 | MSMEG_4591 | MSMEG_4587 | Hypothetical protein; Identified by Glimmer2; putative. | Putative aliphatic sulfonates transport ATP-binding protein SsuB; Part of the ABC transporter complex SsuABC involved in aliphatic sulfonates import. Responsible for energy coupling to the transport system. | 0.518 |
| ABK69971.1 | ssuD-7 | MSMEG_4591 | MSMEG_4590 | Hypothetical protein; Identified by Glimmer2; putative. | Nitrilotriacetate monooxygenase component A. | 0.777 |
| ABK70813.1 | ABK69971.1 | MSMEG_4592 | MSMEG_4591 | Identified by match to protein family HMM PF00441; match to protein family HMM PF08028. | Hypothetical protein; Identified by Glimmer2; putative. | 0.574 |
| ABK70813.1 | ABK72349.1 | MSMEG_4592 | MSMEG_4586 | Identified by match to protein family HMM PF00441; match to protein family HMM PF08028. | ABC nitrate/sulfonate/bicarbonate family protein transporter, periplasmic ligand binding protein. | 0.702 |
| ABK70813.1 | ABK74762.1 | MSMEG_4592 | MSMEG_4588 | Identified by match to protein family HMM PF00441; match to protein family HMM PF08028. | ABC nitrate/sulfonate/bicarbonate family protein transporter, inner membrane subunit; Identified by match to protein family HMM PF00528. | 0.500 |
| ABK70813.1 | ABK76066.1 | MSMEG_4592 | MSMEG_4593 | Identified by match to protein family HMM PF00441; match to protein family HMM PF08028. | acyl-CoA dehydrogenase. | 0.785 |
| ABK70813.1 | ssuB-2 | MSMEG_4592 | MSMEG_4587 | Identified by match to protein family HMM PF00441; match to protein family HMM PF08028. | Putative aliphatic sulfonates transport ATP-binding protein SsuB; Part of the ABC transporter complex SsuABC involved in aliphatic sulfonates import. Responsible for energy coupling to the transport system. | 0.558 |
| ABK70813.1 | ssuD-7 | MSMEG_4592 | MSMEG_4590 | Identified by match to protein family HMM PF00441; match to protein family HMM PF08028. | Nitrilotriacetate monooxygenase component A. | 0.662 |
| ABK72349.1 | ABK69971.1 | MSMEG_4586 | MSMEG_4591 | ABC nitrate/sulfonate/bicarbonate family protein transporter, periplasmic ligand binding protein. | Hypothetical protein; Identified by Glimmer2; putative. | 0.523 |
| ABK72349.1 | ABK70813.1 | MSMEG_4586 | MSMEG_4592 | ABC nitrate/sulfonate/bicarbonate family protein transporter, periplasmic ligand binding protein. | Identified by match to protein family HMM PF00441; match to protein family HMM PF08028. | 0.702 |
| ABK72349.1 | ABK73818.1 | MSMEG_4586 | MSMEG_4589 | ABC nitrate/sulfonate/bicarbonate family protein transporter, periplasmic ligand binding protein. | Rhodanese domain protein/cystathionine beta-lyase. | 0.891 |
| ABK72349.1 | ABK74762.1 | MSMEG_4586 | MSMEG_4588 | ABC nitrate/sulfonate/bicarbonate family protein transporter, periplasmic ligand binding protein. | ABC nitrate/sulfonate/bicarbonate family protein transporter, inner membrane subunit; Identified by match to protein family HMM PF00528. | 0.994 |
| ABK72349.1 | ABK76066.1 | MSMEG_4586 | MSMEG_4593 | ABC nitrate/sulfonate/bicarbonate family protein transporter, periplasmic ligand binding protein. | acyl-CoA dehydrogenase. | 0.612 |
| ABK72349.1 | ssuB-2 | MSMEG_4586 | MSMEG_4587 | ABC nitrate/sulfonate/bicarbonate family protein transporter, periplasmic ligand binding protein. | Putative aliphatic sulfonates transport ATP-binding protein SsuB; Part of the ABC transporter complex SsuABC involved in aliphatic sulfonates import. Responsible for energy coupling to the transport system. | 0.990 |
| ABK72349.1 | ssuD-7 | MSMEG_4586 | MSMEG_4590 | ABC nitrate/sulfonate/bicarbonate family protein transporter, periplasmic ligand binding protein. | Nitrilotriacetate monooxygenase component A. | 0.736 |
page 1 of 3