STRINGSTRING
ABK76066.1 ABK76066.1 ABK70813.1 ABK70813.1 ABK74629.1 ABK74629.1 ABK70710.1 ABK70710.1 ABK75990.1 ABK75990.1 ABK76145.1 ABK76145.1 nuoI nuoI ABK72349.1 ABK72349.1 etfB etfB etfA etfA ABK71450.1 ABK71450.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
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Textmining
[Homology]
Score
ABK76066.1acyl-CoA dehydrogenase. (163 aa)    
Predicted Functional Partners:
ABK70813.1
Identified by match to protein family HMM PF00441; match to protein family HMM PF08028.
 
   
0.785
ABK74629.1
acyl-CoA dehydrogenase; Identified by match to protein family HMM PF00441; match to protein family HMM PF08028.
  
    0.777
ABK70710.1
acyl-CoA dehydrogenase; Identified by match to protein family HMM PF08028.
  
    0.770
ABK75990.1
Putative 3-hydroxyacyl-CoA dehydrogenase; Identified by match to protein family HMM PF00378; match to protein family HMM PF00725; match to protein family HMM PF02737.
  
 0.701
ABK76145.1
enoyl-CoA hydratase; Identified by match to protein family HMM PF00378.
 
 0.638
nuoI
NADH-quinone oxidoreductase, I subunit; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.
  
 0.620
ABK72349.1
ABC nitrate/sulfonate/bicarbonate family protein transporter, periplasmic ligand binding protein.
 
    0.612
etfB
Electron transfer flavoprotein, beta subunit; Identified by similarity to SP:O85691; match to protein family HMM PF01012.
  
 
 0.604
etfA
Electron transfer flavoprotein, alpha subunit; Identified by similarity to SP:P38974; match to protein family HMM PF00766; match to protein family HMM PF01012.
  
 
 0.604
ABK71450.1
enoyl-CoA hydratase; Identified by match to protein family HMM PF00378.
  
 0.598
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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