Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABK70442.1 | ABK75234.1 | MSMEG_0085 | MSMEG_4596 | PTS system, Fru family protein, IIABC components; Identified by match to protein family HMM PF00359; match to protein family HMM PF02378; match to protein family HMM PF02379; match to protein family HMM TIGR00829; match to protein family HMM TIGR00848; match to protein family HMM TIGR01427. | Hypothetical protein; Identified by Glimmer2; putative. | 0.401 |
ABK72306.1 | ABK74109.1 | MSMEG_0033 | MSMEG_1642 | Protein phosphatase 2C; Identified by match to protein family HMM PF00481. | ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF00498; match to protein family HMM PF01061. | 0.422 |
ABK72306.1 | ABK75234.1 | MSMEG_0033 | MSMEG_4596 | Protein phosphatase 2C; Identified by match to protein family HMM PF00481. | Hypothetical protein; Identified by Glimmer2; putative. | 0.472 |
ABK74109.1 | ABK72306.1 | MSMEG_1642 | MSMEG_0033 | ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF00498; match to protein family HMM PF01061. | Protein phosphatase 2C; Identified by match to protein family HMM PF00481. | 0.422 |
ABK74109.1 | ABK75234.1 | MSMEG_1642 | MSMEG_4596 | ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF00498; match to protein family HMM PF01061. | Hypothetical protein; Identified by Glimmer2; putative. | 0.489 |
ABK74109.1 | ABK75945.1 | MSMEG_1642 | MSMEG_1928 | ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF00498; match to protein family HMM PF01061. | Identified by match to protein family HMM PF00481. | 0.705 |
ABK75234.1 | ABK70442.1 | MSMEG_4596 | MSMEG_0085 | Hypothetical protein; Identified by Glimmer2; putative. | PTS system, Fru family protein, IIABC components; Identified by match to protein family HMM PF00359; match to protein family HMM PF02378; match to protein family HMM PF02379; match to protein family HMM TIGR00829; match to protein family HMM TIGR00848; match to protein family HMM TIGR01427. | 0.401 |
ABK75234.1 | ABK72306.1 | MSMEG_4596 | MSMEG_0033 | Hypothetical protein; Identified by Glimmer2; putative. | Protein phosphatase 2C; Identified by match to protein family HMM PF00481. | 0.472 |
ABK75234.1 | ABK74109.1 | MSMEG_4596 | MSMEG_1642 | Hypothetical protein; Identified by Glimmer2; putative. | ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF00498; match to protein family HMM PF01061. | 0.489 |
ABK75234.1 | ABK75945.1 | MSMEG_4596 | MSMEG_1928 | Hypothetical protein; Identified by Glimmer2; putative. | Identified by match to protein family HMM PF00481. | 0.472 |
ABK75234.1 | lppH | MSMEG_4596 | MSMEG_4597 | Hypothetical protein; Identified by Glimmer2; putative. | Putative conserved lipoprotein lpph. | 0.580 |
ABK75945.1 | ABK74109.1 | MSMEG_1928 | MSMEG_1642 | Identified by match to protein family HMM PF00481. | ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF00498; match to protein family HMM PF01061. | 0.705 |
ABK75945.1 | ABK75234.1 | MSMEG_1928 | MSMEG_4596 | Identified by match to protein family HMM PF00481. | Hypothetical protein; Identified by Glimmer2; putative. | 0.472 |
lppH | ABK75234.1 | MSMEG_4597 | MSMEG_4596 | Putative conserved lipoprotein lpph. | Hypothetical protein; Identified by Glimmer2; putative. | 0.580 |