Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ABK71788.1 | ABK72103.1 | MSMEG_6546 | MSMEG_0778 | Transcriptional regulatory protein; Identified by match to protein family HMM PF00165. | Putative transcriptional regulator; Identified by match to protein family HMM PF00392; match to protein family HMM PF07702. | 0.421 |
| ABK71788.1 | ABK74092.1 | MSMEG_6546 | MSMEG_4601 | Transcriptional regulatory protein; Identified by match to protein family HMM PF00165. | Transcriptional regulator, AraC family protein; Identified by match to protein family HMM PF00165. | 0.414 |
| ABK71788.1 | ABK74367.1 | MSMEG_6546 | MSMEG_0268 | Transcriptional regulatory protein; Identified by match to protein family HMM PF00165. | Transcriptional regulator, GntR family protein; Identified by match to protein family HMM PF00392; match to protein family HMM PF02082; match to protein family HMM PF07702. | 0.421 |
| ABK71788.1 | ABK74448.1 | MSMEG_6546 | MSMEG_0548 | Transcriptional regulatory protein; Identified by match to protein family HMM PF00165. | Chromosome replication initiation inhibitor protein; Identified by match to protein family HMM PF00126; Belongs to the LysR transcriptional regulatory family. | 0.430 |
| ABK71788.1 | ABK75962.1 | MSMEG_6546 | MSMEG_2039 | Transcriptional regulatory protein; Identified by match to protein family HMM PF00165. | Putative transcriptional regulator; Identified by match to protein family HMM PF00165. | 0.514 |
| ABK71788.1 | cobB-2 | MSMEG_6546 | MSMEG_4620 | Transcriptional regulatory protein; Identified by match to protein family HMM PF00165. | NAD-dependent deacetylase 1; NAD-dependent protein deacetylase which modulates the activities of several enzymes which are inactive in their acetylated form; Belongs to the sirtuin family. Class II subfamily. | 0.476 |
| ABK71788.1 | sir2 | MSMEG_6546 | MSMEG_5175 | Transcriptional regulatory protein; Identified by match to protein family HMM PF00165. | NAD-dependent deacetylase; NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form. | 0.476 |
| ABK72103.1 | ABK71788.1 | MSMEG_0778 | MSMEG_6546 | Putative transcriptional regulator; Identified by match to protein family HMM PF00392; match to protein family HMM PF07702. | Transcriptional regulatory protein; Identified by match to protein family HMM PF00165. | 0.421 |
| ABK72103.1 | ABK74092.1 | MSMEG_0778 | MSMEG_4601 | Putative transcriptional regulator; Identified by match to protein family HMM PF00392; match to protein family HMM PF07702. | Transcriptional regulator, AraC family protein; Identified by match to protein family HMM PF00165. | 0.405 |
| ABK72103.1 | ABK74448.1 | MSMEG_0778 | MSMEG_0548 | Putative transcriptional regulator; Identified by match to protein family HMM PF00392; match to protein family HMM PF07702. | Chromosome replication initiation inhibitor protein; Identified by match to protein family HMM PF00126; Belongs to the LysR transcriptional regulatory family. | 0.451 |
| ABK72739.1 | ABK73374.1 | MSMEG_0011 | MSMEG_2511 | FAD-binding 9, siderophore-interacting; Identified by match to protein family HMM PF04954; match to protein family HMM PF08021. | Siderophore utilization protein; Identified by match to protein family HMM PF04954; match to protein family HMM PF08021. | 0.768 |
| ABK72739.1 | ABK74092.1 | MSMEG_0011 | MSMEG_4601 | FAD-binding 9, siderophore-interacting; Identified by match to protein family HMM PF04954; match to protein family HMM PF08021. | Transcriptional regulator, AraC family protein; Identified by match to protein family HMM PF00165. | 0.474 |
| ABK73374.1 | ABK72739.1 | MSMEG_2511 | MSMEG_0011 | Siderophore utilization protein; Identified by match to protein family HMM PF04954; match to protein family HMM PF08021. | FAD-binding 9, siderophore-interacting; Identified by match to protein family HMM PF04954; match to protein family HMM PF08021. | 0.768 |
| ABK73374.1 | ABK74092.1 | MSMEG_2511 | MSMEG_4601 | Siderophore utilization protein; Identified by match to protein family HMM PF04954; match to protein family HMM PF08021. | Transcriptional regulator, AraC family protein; Identified by match to protein family HMM PF00165. | 0.438 |
| ABK74092.1 | ABK71788.1 | MSMEG_4601 | MSMEG_6546 | Transcriptional regulator, AraC family protein; Identified by match to protein family HMM PF00165. | Transcriptional regulatory protein; Identified by match to protein family HMM PF00165. | 0.414 |
| ABK74092.1 | ABK72103.1 | MSMEG_4601 | MSMEG_0778 | Transcriptional regulator, AraC family protein; Identified by match to protein family HMM PF00165. | Putative transcriptional regulator; Identified by match to protein family HMM PF00392; match to protein family HMM PF07702. | 0.405 |
| ABK74092.1 | ABK72739.1 | MSMEG_4601 | MSMEG_0011 | Transcriptional regulator, AraC family protein; Identified by match to protein family HMM PF00165. | FAD-binding 9, siderophore-interacting; Identified by match to protein family HMM PF04954; match to protein family HMM PF08021. | 0.474 |
| ABK74092.1 | ABK73374.1 | MSMEG_4601 | MSMEG_2511 | Transcriptional regulator, AraC family protein; Identified by match to protein family HMM PF00165. | Siderophore utilization protein; Identified by match to protein family HMM PF04954; match to protein family HMM PF08021. | 0.438 |
| ABK74092.1 | ABK74367.1 | MSMEG_4601 | MSMEG_0268 | Transcriptional regulator, AraC family protein; Identified by match to protein family HMM PF00165. | Transcriptional regulator, GntR family protein; Identified by match to protein family HMM PF00392; match to protein family HMM PF02082; match to protein family HMM PF07702. | 0.405 |
| ABK74092.1 | ABK74448.1 | MSMEG_4601 | MSMEG_0548 | Transcriptional regulator, AraC family protein; Identified by match to protein family HMM PF00165. | Chromosome replication initiation inhibitor protein; Identified by match to protein family HMM PF00126; Belongs to the LysR transcriptional regulatory family. | 0.553 |
page 1 of 3