Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ABK69707.1 | ABK69745.1 | MSMEG_4611 | MSMEG_4609 | Identified by match to protein family HMM PF03600; match to protein family HMM PF06808; match to protein family HMM PF07158. | Transcriptional regulator LysR family protein; Identified by match to protein family HMM PF00126; match to protein family HMM PF03466; Belongs to the LysR transcriptional regulatory family. | 0.564 |
| ABK69707.1 | ABK69944.1 | MSMEG_4611 | MSMEG_5642 | Identified by match to protein family HMM PF03600; match to protein family HMM PF06808; match to protein family HMM PF07158. | Acetyl-coenzyme a carboxylase carboxyl transferase; Identified by match to protein family HMM PF01039. | 0.470 |
| ABK69707.1 | ABK70383.1 | MSMEG_4611 | MSMEG_4610 | Identified by match to protein family HMM PF03600; match to protein family HMM PF06808; match to protein family HMM PF07158. | IgiC, putative; Identified by match to protein family HMM PF01177. | 0.742 |
| ABK69707.1 | ABK70628.1 | MSMEG_4611 | MSMEG_4209 | Identified by match to protein family HMM PF03600; match to protein family HMM PF06808; match to protein family HMM PF07158. | Integral membrane protein. | 0.499 |
| ABK69707.1 | ABK71317.1 | MSMEG_4611 | MSMEG_1784 | Identified by match to protein family HMM PF03600; match to protein family HMM PF06808; match to protein family HMM PF07158. | Type I topoisomerase. | 0.525 |
| ABK69707.1 | ABK72840.1 | MSMEG_4611 | MSMEG_6389 | Identified by match to protein family HMM PF03600; match to protein family HMM PF06808; match to protein family HMM PF07158. | Probable arabinosyltransferase A; Identified by match to protein family HMM PF04602. | 0.547 |
| ABK69707.1 | ABK73923.1 | MSMEG_4611 | MSMEG_0848 | Identified by match to protein family HMM PF03600; match to protein family HMM PF06808; match to protein family HMM PF07158. | NADH ubiquinone oxidoreductase subunit 5; Identified by match to protein family HMM PF00361; match to protein family HMM PF04039. | 0.454 |
| ABK69707.1 | ABK74482.1 | MSMEG_4611 | MSMEG_2116 | Identified by match to protein family HMM PF03600; match to protein family HMM PF06808; match to protein family HMM PF07158. | PTS system, glucose-specific IIBC component; Identified by match to protein family HMM PF00367; match to protein family HMM PF02378; match to protein family HMM TIGR00826. | 0.445 |
| ABK69707.1 | accD | MSMEG_4611 | MSMEG_2169 | Identified by match to protein family HMM PF03600; match to protein family HMM PF06808; match to protein family HMM PF07158. | acetyl-CoA carboxylase, carboxyl transferase, beta subunit; Identified by match to protein family HMM PF01039. | 0.475 |
| ABK69707.1 | aftD | MSMEG_4611 | MSMEG_0359 | Identified by match to protein family HMM PF03600; match to protein family HMM PF06808; match to protein family HMM PF07158. | Conserved hypothetical protein; Involved in the biosynthesis of the arabinogalactan (AG) region of the mycolylarabinogalactan-peptidoglycan (mAGP) complex, an essential component of the mycobacterial cell wall. Catalyzes the addition of an arabinofuranosyl (Araf) residue from the sugar donor decaprenyl-phospho-arabinose (DPA) on the C-3 of an alpha-(1->5)-linked Araf from the arabinan backbone of AG. | 0.662 |
| ABK69745.1 | ABK69707.1 | MSMEG_4609 | MSMEG_4611 | Transcriptional regulator LysR family protein; Identified by match to protein family HMM PF00126; match to protein family HMM PF03466; Belongs to the LysR transcriptional regulatory family. | Identified by match to protein family HMM PF03600; match to protein family HMM PF06808; match to protein family HMM PF07158. | 0.564 |
| ABK69745.1 | ABK70383.1 | MSMEG_4609 | MSMEG_4610 | Transcriptional regulator LysR family protein; Identified by match to protein family HMM PF00126; match to protein family HMM PF03466; Belongs to the LysR transcriptional regulatory family. | IgiC, putative; Identified by match to protein family HMM PF01177. | 0.551 |
| ABK69944.1 | ABK69707.1 | MSMEG_5642 | MSMEG_4611 | Acetyl-coenzyme a carboxylase carboxyl transferase; Identified by match to protein family HMM PF01039. | Identified by match to protein family HMM PF03600; match to protein family HMM PF06808; match to protein family HMM PF07158. | 0.470 |
| ABK69944.1 | accD | MSMEG_5642 | MSMEG_2169 | Acetyl-coenzyme a carboxylase carboxyl transferase; Identified by match to protein family HMM PF01039. | acetyl-CoA carboxylase, carboxyl transferase, beta subunit; Identified by match to protein family HMM PF01039. | 0.997 |
| ABK70383.1 | ABK69707.1 | MSMEG_4610 | MSMEG_4611 | IgiC, putative; Identified by match to protein family HMM PF01177. | Identified by match to protein family HMM PF03600; match to protein family HMM PF06808; match to protein family HMM PF07158. | 0.742 |
| ABK70383.1 | ABK69745.1 | MSMEG_4610 | MSMEG_4609 | IgiC, putative; Identified by match to protein family HMM PF01177. | Transcriptional regulator LysR family protein; Identified by match to protein family HMM PF00126; match to protein family HMM PF03466; Belongs to the LysR transcriptional regulatory family. | 0.551 |
| ABK70628.1 | ABK69707.1 | MSMEG_4209 | MSMEG_4611 | Integral membrane protein. | Identified by match to protein family HMM PF03600; match to protein family HMM PF06808; match to protein family HMM PF07158. | 0.499 |
| ABK71317.1 | ABK69707.1 | MSMEG_1784 | MSMEG_4611 | Type I topoisomerase. | Identified by match to protein family HMM PF03600; match to protein family HMM PF06808; match to protein family HMM PF07158. | 0.525 |
| ABK72840.1 | ABK69707.1 | MSMEG_6389 | MSMEG_4611 | Probable arabinosyltransferase A; Identified by match to protein family HMM PF04602. | Identified by match to protein family HMM PF03600; match to protein family HMM PF06808; match to protein family HMM PF07158. | 0.547 |
| ABK72840.1 | aftD | MSMEG_6389 | MSMEG_0359 | Probable arabinosyltransferase A; Identified by match to protein family HMM PF04602. | Conserved hypothetical protein; Involved in the biosynthesis of the arabinogalactan (AG) region of the mycolylarabinogalactan-peptidoglycan (mAGP) complex, an essential component of the mycobacterial cell wall. Catalyzes the addition of an arabinofuranosyl (Araf) residue from the sugar donor decaprenyl-phospho-arabinose (DPA) on the C-3 of an alpha-(1->5)-linked Araf from the arabinan backbone of AG. | 0.477 |
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