STRINGSTRING
ABK76081.1 ABK76081.1 ABK73082.1 ABK73082.1 ABK70099.1 ABK70099.1 ABK76227.1 ABK76227.1 ABK70243.1 ABK70243.1 ABK73420.1 ABK73420.1 ABK76114.1 ABK76114.1 glnT glnT ABK69590.1 ABK69590.1 ABK71222.1 ABK71222.1 ABK74998.1 ABK74998.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK76081.1Identified by match to protein family HMM PF00909. (449 aa)    
Predicted Functional Partners:
ABK73082.1
Nitrogen regulatory protein P-II; Identified by match to protein family HMM PF00543; Belongs to the P(II) protein family.
 
 0.975
ABK70099.1
Ferredoxin-dependent glutamate synthase 1; Identified by match to protein family HMM PF00310; match to protein family HMM PF01493; match to protein family HMM PF01645; match to protein family HMM PF04898.
 
  
 0.817
ABK76227.1
Hypothetical protein; Identified by Glimmer2; putative.
  
    0.793
ABK70243.1
Ferredoxin-dependent glutamate synthase 1; Identified by match to protein family HMM PF00310; match to protein family HMM PF01493; match to protein family HMM PF01645; match to protein family HMM PF04898.
 
  
 0.758
ABK73420.1
Identified by match to protein family HMM PF01070; match to protein family HMM PF01180; match to protein family HMM PF01645; Belongs to the glutamate synthase family.
 
  
 0.738
ABK76114.1
Identified by match to protein family HMM PF01493.
 
  
 0.730
glnT
Glutamine synthetase, type III; Identified by match to protein family HMM PF00120; match to protein family HMM TIGR03105; Belongs to the glutamine synthetase family.
 
  
 0.706
ABK69590.1
Ferredoxin-dependent glutamate synthase; Identified by match to protein family HMM PF00355; match to protein family HMM PF01645; Belongs to the glutamate synthase family.
 
  
 0.672
ABK71222.1
Glutamine amidotransferase, class II; Identified by match to protein family HMM PF00310.
 
  
 0.661
ABK74998.1
Transcriptional regulator; Identified by match to protein family HMM PF01381; match to protein family HMM PF07883.
 
   
 0.653
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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